RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CARTPTQ16568 116 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 RNLSQ5VYX0 342 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 DPY19L2P2Q6ZN68 376 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 OR52N1Q8NH53 320 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 ZPLD1Q8TCW7 415 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 FOXN4Q96NZ1 517 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 CNN2Q99439 309 aaKnown RBP12.45□□□□□ -0.42
CLK3-203ENST00000454830 IER2Q9BTL4 223 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 LAT2Q9GZY6 243 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 GALNT9Q9HCQ5 603 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 BDP1A6H8Y1 2624 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 TOX3O15405 576 aaPredicted RBP12.45□□□□□ -0.42
CLK3-203ENST00000454830 ARHGEF9O43307 516 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 SELENOFO60613 162 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 ZNF74Q16587 644 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 OTPQ5XKR4 325 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 ZNF511Q8NB15 262 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 DCLRE1CQ96SD1 692 aaKnown RBP12.45□□□□□ -0.42
CLK3-203ENST00000454830 OR11A1Q9GZK7 315 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 ETAA1Q9NY74 926 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 IGKV1D-42A0A075B6H8 117 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 LY6G6EA0A0G2JKS1 128 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 TEX51A0A1B0GUA7 166 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 E9PI62 339 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 RNF13O43567 381 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 RPP14O95059 124 aaKnown RBP12.45□□□□□ -0.42
CLK3-203ENST00000454830 TAB1Q15750 504 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 BTBD16Q32M84 506 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 ZNF362Q5T0B9 420 aaPredicted RBP12.45□□□□□ -0.42
CLK3-203ENST00000454830 C19orf48Q6RUI8 117 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 PLPP5Q8NEB5 264 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 TIGARQ9NQ88 270 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 TAS2R10Q9NYW0 307 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 KLHL21Q9UJP4 597 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 ICAM5Q9UMF0 924 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 U3KQA8 63 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 TVP23AA6NH52 213 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 H3BSH0 61 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 TMCC2O75069 709 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 IGHA1P01876 353 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 OPN1LWP04000 364 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 CCL4P13236 92 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 CCKBRP32239 447 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 PSMB10P40306 273 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 DUSP3P51452 185 aaPredicted RBP12.44□□□□□ -0.42
CLK3-203ENST00000454830 PNLIPRP2P54317 469 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 ZNF45Q02386 682 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 CBFBQ13951 182 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 TBC1D25Q3MII6 688 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 LCN1P1Q5VSP4 162 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 BICRALQ6AI39 1079 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 TAAR8Q969N4 342 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 SLC35B4Q969S0 331 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 ZNF524Q96C55 264 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 DEFB126Q9BYW3 111 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 CCDC86Q9H6F5 360 aaKnown RBP12.44□□□□□ -0.42
CLK3-203ENST00000454830 ADGRL4Q9HBW9 690 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 MMP25Q9NPA2 562 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 CHRNA9Q9UGM1 479 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 B3GNT3Q9Y2A9 372 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 PCDHGB6Q9Y5F9 930 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 MUC3AQ02505 3323 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 TP53BP1Q12888 1972 aaPredicted RBP12.44□□□□□ -0.42
CLK3-203ENST00000454830 OR6C68A6NDL8 312 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 XKRYO14609 159 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 CBFA2T3O75081 653 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 SYPP08247 313 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 RPL18Q07020 188 aaKnown RBP12.44□□□□□ -0.42
CLK3-203ENST00000454830 GALEQ14376 348 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 LCN10Q6JVE6 187 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 LINC00114Q6XXX2 140 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 RFLNBQ8N5W9 214 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 RHBDD1Q8TEB9 315 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 NDEL1Q9GZM8 345 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 METTL7AQ9H8H3 244 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 MED11Q9P086 117 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 SAGE2PA6NJ88 616 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 DVL2O14641 736 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 SUSD5O60279 629 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 UPK1BO75841 260 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 E2F1Q01094 437 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 COL28A1Q2UY09 1125 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 SLC35F2Q8IXU6 374 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 KDM8Q8N371 416 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 AGBL5Q8NDL9 886 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 CHPT1Q8WUD6 406 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 FAIMQ9NVQ4 179 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 IKZF2Q9UKS7 526 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 PTRH2Q9Y3E5 179 aaKnown RBP12.44□□□□□ -0.42
CLK3-203ENST00000454830 CMAHPQ9Y471 501 aa12.44□□□□□ -0.42
CLK3-203ENST00000454830 SIRT4Q9Y6E7 314 aaPredicted RBP12.44□□□□□ -0.42
CLK3-203ENST00000454830 FAM25AB3EWG3 89 aa12.43□□□□□ -0.42
CLK3-203ENST00000454830 FAM25CB3EWG5 89 aa12.43□□□□□ -0.42
CLK3-203ENST00000454830 FAM25GB3EWG6 89 aa12.43□□□□□ -0.42
CLK3-203ENST00000454830 ALG1L2C9J202 215 aa12.43□□□□□ -0.42
CLK3-203ENST00000454830 TAF4O00268 1085 aa12.43□□□□□ -0.42
CLK3-203ENST00000454830 TSPAN2O60636 221 aa12.43□□□□□ -0.42
CLK3-203ENST00000454830 SULT1C4O75897 302 aa12.43□□□□□ -0.42
CLK3-203ENST00000454830 GUSBP08236 651 aa12.43□□□□□ -0.42
CLK3-203ENST00000454830 CD14P08571 375 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms