RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 NUDT15Q9NV35 164 aa12.21□□□□□ -0.45
LINC00343-203ENST00000454555 EIF3KQ9UBQ5 218 aaKnown RBP12.21□□□□□ -0.45
LINC00343-203ENST00000454555 EPHA6Q9UF33 1036 aa12.21□□□□□ -0.45
LINC00343-203ENST00000454555 SLC23A1Q9UHI7 598 aa12.21□□□□□ -0.45
LINC00343-203ENST00000454555 MGAT4AQ9UM21 535 aa12.21□□□□□ -0.45
LINC00343-203ENST00000454555 LAMA1P25391 3075 aa12.21□□□□□ -0.46
LINC00343-203ENST00000454555 URADA6NGE7 173 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SLC9B1P1A6NJY1 282 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 C2orf74A8MZ97 194 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 DUX1O43812 170 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 PIP5K1CO60331 668 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 PRKRAO75569 313 aaKnown RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SLC2A10O95528 541 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ECDO95905 644 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 IFNGP01579 166 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 NID1P14543 1247 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ZNF10P21506 573 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 TBXA2RP21731 343 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 CD1CP29017 333 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 AP3S2P59780 193 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SLC36A2Q495M3 483 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ZNF613Q6PF04 617 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ARL9Q6T311 187 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ASB18Q6ZVZ8 466 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 OVCH1Q7RTY7 1134 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 MEX3DQ86XN8 651 aaKnown RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ZNF655Q8N720 491 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 TMEM99Q8N816 258 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ZNF680Q8NEM1 530 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 OR10H4Q8NGA5 316 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 HAVCR2Q8TDQ0 301 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 YIPF5Q969M3 257 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ZG16BQ96DA0 208 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 C10orf90Q96M02 699 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 STACQ99469 402 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 DUSP22Q9NRW4 184 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SPHK1Q9NYA1 384 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SCP2D1Q9UJQ7 156 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 MED31Q9Y3C7 131 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 PCDHGA1Q9Y5H4 931 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 A0A087WV62 115 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 MEIKINA0A087WXM9 373 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 A0A1W2PQM1 296 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 C4orf51C9J302 202 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 LANCL1O43813 399 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 TPPPO94811 219 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ZIC2O95409 532 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 GUSBP08236 651 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SULT1A3P0DMM9 295 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SULT1A4P0DMN0 295 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 C8orf89P0DMQ9 161 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 POLR2CP19387 275 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SLC2A5P22732 501 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 PEBP1P30086 187 aaKnown RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 TLX1P31314 330 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 RBM34P42696 430 aaKnown RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SNRPD2P62316 118 aaKnown RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 MADCAM1Q13477 382 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 INSL4Q14641 139 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 TRIP6Q15654 476 aaKnown RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ZSWIM7Q19AV6 140 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 CLLU1Q5K131 121 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ARMC6Q6NXE6 501 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ARHGAP11AQ6P4F7 1023 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 WDR74Q6RFH5 385 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 LYPD8Q6UX82 237 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 RFPL4BQ6ZWI9 263 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 KRT74Q7RTS7 529 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 HMGN2P46Q86SG4 172 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SLITRK4Q8IW52 837 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 POMGNT2Q8NAT1 580 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 OR11H7Q8NGC8 314 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 OR4K14Q8NGD5 310 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 FLVCR1-AS1Q8TAF5 88 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 C15orf40Q8WUR7 153 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 PGLYRP3Q96LB9 341 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SORCS2Q96PQ0 1159 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ABHD1Q96SE0 405 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SDF2Q99470 211 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 DPYSL5Q9BPU6 564 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 CACNG6Q9BXT2 260 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ACTR10Q9NZ32 417 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 ZNF222Q9UK12 451 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SPATA2Q9UM82 520 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 NPTNQ9Y639 398 aa12.2□□□□□ -0.46
LINC00343-203ENST00000454555 SIRT4Q9Y6E7 314 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 MDC1Q14676 2089 aaKnown RBP12.2□□□□□ -0.46
LINC00343-203ENST00000454555 EP300Q09472 2414 aaPredicted RBP12.19□□□□□ -0.46
LINC00343-203ENST00000454555 FAM183AA6NL82 134 aa12.19□□□□□ -0.46
LINC00343-203ENST00000454555 NTN3O00634 580 aaPredicted RBP12.19□□□□□ -0.46
LINC00343-203ENST00000454555 OGG1O15527 345 aa12.19□□□□□ -0.46
LINC00343-203ENST00000454555 FCMRO60667 390 aa12.19□□□□□ -0.46
LINC00343-203ENST00000454555 H2AFB2P0C5Z0 115 aa12.19□□□□□ -0.46
LINC00343-203ENST00000454555 IFI30P13284 250 aa12.19□□□□□ -0.46
LINC00343-203ENST00000454555 PRG2P13727 222 aa12.19□□□□□ -0.46
LINC00343-203ENST00000454555 CCL7P80098 99 aa12.19□□□□□ -0.46
LINC00343-203ENST00000454555 MRPS10P82664 201 aaKnown RBP12.19□□□□□ -0.46
LINC00343-203ENST00000454555 E2F1Q01094 437 aa12.19□□□□□ -0.46
LINC00343-203ENST00000454555 CFHR1Q03591 330 aa12.19□□□□□ -0.46
LINC00343-203ENST00000454555 ZNF750Q32MQ0 723 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms