RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CADM3Q8N126 398 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 UBE2J2Q8N2K1 259 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 DTX3Q8N9I9 347 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 SRA1Q9HD15 236 aaKnown RBP10.74□□□□□ -0.69
VTA1-203ENST00000452973 ZMIZ1Q9ULJ6 1067 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 FABP12A6NFH5 140 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 C11orf98E9PRG8 122 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 TMCC2O75069 709 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 PNMTP11086 282 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 CXCR1P25024 350 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 DDI2Q5TDH0 399 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 OTPQ5XKR4 325 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 PMS2CLQ68D20 193 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 DPY19L2P2Q6ZN68 376 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 CARFQ8N187 725 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 ARIH2OSQ8N7S6 290 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 SAP25Q8TEE9 199 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 DUSP19Q8WTR2 217 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 SNX33Q8WV41 574 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 C8orf44Q96CB5 159 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 MIXL1Q9H2W2 232 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 PLGP00747 810 aaPredicted RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 FGF9P31371 208 aaPredicted RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 ZNF74Q16587 644 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 BAK1Q16611 211 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 ALG10Q5BKT4 473 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 SPATC1Q76KD6 591 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 COX15Q7KZN9 410 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 KMT5CQ86Y97 462 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 ZNF511Q8NB15 262 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 FAM71CQ8NEG0 241 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 SLC35B4Q969S0 331 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 DUSP23Q9BVJ7 150 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 PPIL3Q9H2H8 161 aaKnown RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 AKIRIN1Q9H9L7 192 aaPredicted RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 GNG8Q9UK08 70 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 V9GYH0 126 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 CNTRLQ7Z7A1 2325 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 IGHV5-10-1A0A0J9YXX1 117 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 A0A1B0GTQ1 180 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 IQCMA0A1B0GVH7 501 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 A0A1W2PPC1 479 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 HPGDSO60760 199 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 TCEA1P23193 301 aaKnown RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 AHCYP23526 432 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 SHC1P29353 583 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 PSMB10P40306 273 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 CDKN2AP42771 156 aaKnown RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 LTBQ06643 244 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 RHBDD2Q6NTF9 364 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 CD200R1LQ6Q8B3 271 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 JAZF1Q86VZ6 243 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 NPEPL1Q8NDH3 523 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 EDAQ92838 391 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 TAAR8Q969N4 342 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 CCDC74BQ96LY2 380 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 CNN2Q99439 309 aaKnown RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 LPAR4Q99677 370 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 NEURL2Q9BR09 285 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 GTPBP2Q9BX10 602 aaKnown RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 MMP25Q9NPA2 562 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 NRIP3Q9NQ35 241 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 PILRBQ9UKJ0 227 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 RARRES3Q9UL19 164 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 ADAMTS9Q9P2N4 1935 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 LY6G6EA0A0G2JKS1 128 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 ISPDA4D126 451 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 LAMTOR5O43504 91 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 CPNE3O75131 537 aaKnown RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 RGS9O75916 674 aaPredicted RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 HIST1H2ABP04908 130 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 SPI1P17947 270 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 DEFA1P59665 94 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 DEFA3P59666 94 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 PRPS1P60891 318 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 ZNF79Q15937 498 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 PYDC2Q56P42 97 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 IDNKQ5T6J7 187 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 HIST3H2AQ7L7L0 130 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 VASH1Q7L8A9 365 aaPredicted RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 NANOGNBQ7Z5D8 188 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 CEACAM19Q7Z692 300 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 LSM14AQ8ND56 463 aaKnown RBP10.73□□□□□ -0.69
VTA1-203ENST00000452973 HIST1H2ACQ93077 130 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 SRPK3Q9UPE1 567 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 U3KQA8 63 aa10.73□□□□□ -0.69
VTA1-203ENST00000452973 SLC25A12O75746 678 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 ADH7P40394 386 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 DCAF7P61962 342 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 RNF4P78317 190 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 ACY1Q03154 408 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 RPL18Q07020 188 aaKnown RBP10.72□□□□□ -0.69
VTA1-203ENST00000452973 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.72□□□□□ -0.69
VTA1-203ENST00000452973 METTL21AQ8WXB1 218 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 AP3S1Q92572 193 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 FOXN4Q96NZ1 517 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 SMOC1Q9H4F8 434 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 SACM1LQ9NTJ5 587 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 NCOR1O75376 2440 aa10.72□□□□□ -0.69
VTA1-203ENST00000452973 TSPAN2O60636 221 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms