RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 CALHM2Q9HA72 323 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 KRCC1Q9NPI7 259 aaPredicted RBP10.38□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF175Q9Y473 711 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 CORINQ9Y5Q5 1042 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 ARRDC5A6NEK1 342 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 CD8B2A6NJW9 211 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 CXCL13O43927 109 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 BGLAPP02818 100 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 STSP08842 583 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 FPR1P21462 350 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 ACVR2AP27037 513 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 IFNGR2P38484 337 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 SGCBQ16585 318 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF239Q16600 458 aaKnown RBP10.37□□□□□ -0.75
SCN9A-204ENST00000452182 MICAQ29983 383 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 EXOC3L2Q2M3D2 409 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 ACSF3Q4G176 576 aaPredicted RBP10.37□□□□□ -0.75
SCN9A-204ENST00000452182 TBPL2Q6SJ96 375 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 PAQR6Q6TCH4 344 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 TMPRSS11FQ6ZWK6 438 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 ATCAYQ86WG3 371 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 P3H2Q8IVL5 708 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 SCAIQ8N9R8 606 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 PFN4Q8NHR9 129 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 LRTOMTQ8WZ04 291 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 BPIFA2Q96DR5 249 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 ZHX1-C8orf76Q96EF9 292 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 CENPNQ96H22 339 aaPredicted RBP10.37□□□□□ -0.75
SCN9A-204ENST00000452182 PSD2Q9BQI7 771 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 FKRPQ9H9S5 495 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 C20orf141Q9NUB4 165 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 ALKBH4Q9NXW9 302 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 VNN3Q9NY84 501 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 TMEM5Q9Y2B1 443 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 U3KQV3 271 aa10.37□□□□□ -0.75
SCN9A-204ENST00000452182 ENO4A6NNW6 628 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 CLCA1A8K7I4 914 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 KPNA4O00629 521 aaPredicted RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ASAH2BP0C7U1 165 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 FCGR2AP12318 317 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 OMPP47874 163 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ARHGDIAP52565 204 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 CASP6P55212 293 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 LTBQ06643 244 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 OR7A5Q15622 319 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 NSUN5P2Q63ZY6 315 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF770Q6IQ21 691 aaPredicted RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 HMBOX1Q6NT76 420 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 C1orf94Q6P1W5 598 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF585AQ6P3V2 769 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 MAMDC2Q7Z304 686 aaPredicted RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 CDK20Q8IZL9 346 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ADPRHL1Q8NDY3 354 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 PIGXQ8TBF5 258 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 SGTBQ96EQ0 304 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF845Q96IR2 970 aaPredicted RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 MOGAT1Q96PD6 335 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 SRXN1Q9BYN0 137 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 NANSQ9NR45 359 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 CLCF1Q9UBD9 225 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF229Q9UJW7 825 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 MCTS1Q9ULC4 181 aaKnown RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 B3GALT5Q9Y2C3 310 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ARHGAP21Q5T5U3 1957 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 SLC22A20A6NK97 555 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 KLF4O43474 513 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 PIP5K1CO60331 668 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 OR10H3O60404 316 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 E2F6O75461 281 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 OR7A10O76100 309 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 CCNB2O95067 398 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 SYNGR4O95473 234 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 CH25HO95992 272 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 IFI30P13284 250 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 PTNP21246 168 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ENPP1P22413 925 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 CA7P43166 264 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 SLC9A3P48764 834 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 IST1P53990 364 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 NUP107P57740 925 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 OR2B6P58173 313 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 FOXD4Q12950 439 aaPredicted RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 MRPL49Q13405 166 aaKnown RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 PON3Q15166 354 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ANKDD1AQ495B1 522 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 C1orf185Q5T7R7 199 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 RTL6Q6ICC9 239 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 SHQ1Q6PI26 577 aaKnown RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 SLC46A3Q7Z3Q1 461 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 ZER1Q7Z7L7 766 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 TMEM179BQ7Z7N9 219 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 LSRQ86X29 649 aaPredicted RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 PQLC1Q8N2U9 271 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 SLC43A2Q8N370 569 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 OR5K1Q8NHB7 308 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 RNF128Q8TEB7 428 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 SLC25A36Q96CQ1 311 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 NAA11Q9BSU3 229 aaPredicted RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 FANCFQ9NPI8 374 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 MRPL39Q9NYK5 338 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms