RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 PDLIM4P50479 330 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 RPL14P50914 215 aaKnown RBP9.51□□□□□ -0.89
USP1-204ENST00000452143 ABCE1P61221 599 aaKnown RBP9.51□□□□□ -0.89
USP1-204ENST00000452143 EPS8Q12929 822 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 CHI3L2Q15782 390 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 MRPL2Q5T653 305 aaKnown RBP9.51□□□□□ -0.89
USP1-204ENST00000452143 FAM166AQ6J272 317 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 OGFOD2Q6N063 350 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 HMGN2P46Q86SG4 172 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 OR9K2Q8NGE7 335 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 PKNOX2Q96KN3 472 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 PANX1Q96RD7 426 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 KATNB1Q9BVA0 655 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 MTHFD2LQ9H903 347 aaPredicted RBP9.51□□□□□ -0.89
USP1-204ENST00000452143 SSU72Q9NP77 194 aaKnown RBP9.51□□□□□ -0.89
USP1-204ENST00000452143 FBXO9Q9UK97 447 aaPredicted RBP9.51□□□□□ -0.89
USP1-204ENST00000452143 KCNS2Q9ULS6 477 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 A0A096LPI6 279 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 ZC3H12DA2A288 527 aaKnown RBP9.5□□□□□ -0.89
USP1-204ENST00000452143 CDHR4A6H8M9 788 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 LIPT2A6NK58 231 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 TM9SF1O15321 606 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 CRYAAP02489 173 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 SRD5A1P18405 259 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 HNF1AP20823 631 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 IGFBP5P24593 272 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 S100A3P33764 101 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 NR4A2P43354 598 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 SYPL1Q16563 259 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 KRTAP24-1Q3LI83 254 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 C3orf36Q3SXR2 165 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 LIN52Q52LA3 116 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 AAED1Q7RTV5 226 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 GPAT4Q86UL3 456 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 PEX5LQ8IYB4 626 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 ANKFN1Q8N957 763 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 FBXO17Q96EF6 278 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 ZNF385AQ96PM9 386 aaKnown RBP9.5□□□□□ -0.89
USP1-204ENST00000452143 SORCS2Q96PQ0 1159 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 SLC38A2Q96QD8 506 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 SORT1Q99523 831 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 KCNS3Q9BQ31 491 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 TMEM109Q9BVC6 243 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 ADAM19Q9H013 955 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 MEAF6Q9HAF1 191 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 CA10Q9NS85 328 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 TMEM45AQ9NWC5 275 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 MOKQ9UQ07 419 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 DSPPQ9NZW4 1301 aa9.5□□□□□ -0.89
USP1-204ENST00000452143 ARPC4-TTLL3A0A0A6YYG9 625 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 IGHV1-18A0A0C4DH31 117 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 LOC390937A0A1W2PQ73 354 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 CCDC154A6NI56 674 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 A8MVM7 634 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 B9A039 149 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 ZNF587BE7ETH6 402 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 FRS3O43559 492 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 KRT33AO76009 404 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 LY6HO94772 140 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 AKR7A3O95154 331 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 KRT75O95678 551 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 PGRP06401 933 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 NR2F1P10589 423 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 CXCR1P25024 350 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 SERPINF1P36955 418 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 SLC1A6P48664 564 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 PPOXP50336 477 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 SH3BGRP55822 239 aaPredicted RBP9.49□□□□□ -0.89
USP1-204ENST00000452143 UBE2NP61088 152 aaKnown RBP9.49□□□□□ -0.89
USP1-204ENST00000452143 COPZ1P61923 177 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 VSNL1P62760 191 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 CEACAM7Q14002 265 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 GGTLC2Q14390 218 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 OR7A5Q15622 319 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 EFNB3Q15768 340 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 ZSWIM7Q19AV6 140 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 MST1LQ2TV78 715 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 TBRG1Q3YBR2 411 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 HIKESHIQ53FT3 197 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 RNF220Q5VTB9 566 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 WBP2NLQ6ICG8 309 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 SLC46A3Q7Z3Q1 461 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 TMEM99Q8N816 258 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 FAM169BQ8N8A8 192 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 ZIC4Q8N9L1 334 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 ZNF540Q8NDQ6 660 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 OR1K1Q8NGR3 316 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 MAGEE2Q8TD90 523 aaPredicted RBP9.49□□□□□ -0.89
USP1-204ENST00000452143 AENQ8WTP8 325 aaKnown RBP9.49□□□□□ -0.89
USP1-204ENST00000452143 TEX37Q96LM6 180 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 ALKBH3Q96Q83 286 aaPredicted RBP9.49□□□□□ -0.89
USP1-204ENST00000452143 TAPBPLQ9BX59 468 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 NUF2Q9BZD4 464 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 C20orf27Q9GZN8 174 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 AIG1Q9NVV5 245 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 CALML5Q9NZT1 146 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 CRNNQ9UBG3 495 aaPredicted RBP9.49□□□□□ -0.89
USP1-204ENST00000452143 P2RX2Q9UBL9 471 aa9.49□□□□□ -0.89
USP1-204ENST00000452143 LOC100289279A0A1B0GTE1 492 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 WDR91A4D1P6 747 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms