RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 CD40P25942 277 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 TTKP33981 857 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ARFIP2P53365 341 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 SPOCK1Q08629 439 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 GNA13Q14344 377 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 COX20Q5RI15 118 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CGB2Q6NT52 195 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 LRRC74BQ6ZQY2 392 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 DEPDC4Q8N2C3 294 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 WDR60Q8WVS4 1066 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ADAD1Q96M93 576 aaKnown RBP14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 DHRS9Q9BPW9 319 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 RHNO1Q9BSD3 238 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 NAA11Q9BSU3 229 aaPredicted RBP14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CACNG6Q9BXT2 260 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 PARPBPQ9NWS1 579 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 MALT1Q9UDY8 824 aa14.57□□□□□ -0.08
RAB11FIP3-204ENST00000449879 A0A096LPI6 279 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ZC3H12DA2A288 527 aaKnown RBP14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CFAP73A6NFT4 308 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ZNF208O43345 1280 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 SLC1A3P43003 542 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 FABP6P51161 128 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 NUDT6P53370 316 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 NRF1Q16656 503 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 GTDC1Q4AE62 458 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 MRPL2Q5T653 305 aaKnown RBP14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 FBXL14Q8N1E6 418 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 MUC15Q8N387 334 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 HTRA1Q92743 480 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 PAIP1Q9H074 479 aaKnown RBP14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 TPT1P8Q9HAU6 139 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 SLC7A10Q9NS82 523 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CBLN4Q9NTU7 201 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 MRGBPQ9NV56 204 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 RLIMQ9NVW2 624 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 SLC9A8Q9Y2E8 581 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 FLVCR1Q9Y5Y0 555 aa14.56□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CD5LO43866 347 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 DBIP07108 87 aaKnown RBP14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 UQCRBP14927 111 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 EPS8Q12929 822 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 SLC17A1Q14916 467 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 RAB35Q15286 201 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 TSPO2Q5TGU0 170 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 B3GLCTQ6Y288 498 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 PEX5LQ8IYB4 626 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 WDR31Q8NA23 367 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 AURKBQ96GD4 344 aaPredicted RBP14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ZNF317Q96PQ6 595 aaPredicted RBP14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 RAD21L1Q9H4I0 556 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 SLC52A3Q9NQ40 469 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 KLHL14Q9P2G3 628 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 PCDHB14Q9Y5E9 798 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ATP23Q9Y6H3 246 aa14.55□□□□□ -0.08
RAB11FIP3-204ENST00000449879 IGHV4-30-2A0A087WSY4 118 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 PDLIM1O00151 329 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 FAAHO00519 579 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 TLX2O43763 284 aaPredicted RBP14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 GPRIN2O60269 458 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 AKR7A3O95154 331 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 GKN3PP0CG01 181 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 HOXB9P17482 250 aaPredicted RBP14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CDH2P19022 906 aaPredicted RBP14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 RPS4Y1P22090 263 aaKnown RBP14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CXCR1P25024 350 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CRATP43155 626 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 MAP2K6P52564 334 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 MVDP53602 400 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 SF3A3Q12874 501 aaKnown RBP eCLIP14.54□□□□□ -0.083e-8■■■□□ 14.6
RAB11FIP3-204ENST00000449879 CEACAM7Q14002 265 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 PAGE3Q5JUK9 113 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 OTUD3Q5T2D3 398 aaPredicted RBP14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 LRIF1Q5T3J3 769 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 C11orf71Q6IPW1 123 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 PAQR6Q6TCH4 344 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CXXC5Q7LFL8 322 aaKnown RBP14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 VRK2Q86Y07 508 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 TMEM99Q8N816 258 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ADAM19Q9H013 955 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 SLC17A5Q9NRA2 495 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 THUMPD1Q9NXG2 353 aaKnown RBP14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 P2RX2Q9UBL9 471 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 LEF1Q9UJU2 399 aaPredicted RBP14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 DNHD1Q96M86 4753 aa14.54□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CLIC1O00299 241 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ANGPT2O15123 496 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 GPIP06744 558 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ETFAP13804 333 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 DSTNP60981 165 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 TGFBR3Q03167 851 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 OR7A5Q15622 319 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 HMBOX1Q6NT76 420 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CLEC2AQ6UVW9 174 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 AAED1Q7RTV5 226 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 ZNF440Q8IYI8 595 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 CADM2Q8N3J6 435 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 OR52P1PQ8NH57 321 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 TSPEARQ8WU66 669 aa14.53□□□□□ -0.08
RAB11FIP3-204ENST00000449879 TMEM247A6NEH6 219 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms