RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 KRT71Q3SY84 523 aa13.56□□□□□ -0.24
TRA2A-203ENST00000448549 C1QTNF12Q5T7M4 302 aa13.56□□□□□ -0.24
TRA2A-203ENST00000448549 POMGNT2Q8NAT1 580 aa13.56□□□□□ -0.24
TRA2A-203ENST00000448549 OR52E6Q96RD3 313 aa13.56□□□□□ -0.24
TRA2A-203ENST00000448549 SF3B5Q9BWJ5 86 aaKnown RBP13.56□□□□□ -0.24
TRA2A-203ENST00000448549 SHARPINQ9H0F6 387 aa13.56□□□□□ -0.24
TRA2A-203ENST00000448549 HAO1Q9UJM8 370 aa13.56□□□□□ -0.24
TRA2A-203ENST00000448549 ALPK2Q86TB3 2170 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 AQP7P3A6NL99 342 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 RGS16O15492 202 aaPredicted RBP13.55□□□□□ -0.24
TRA2A-203ENST00000448549 LMX1BO60663 402 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 KRT33AO76009 404 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 TXNL4AP83876 142 aaKnown RBP13.55□□□□□ -0.24
TRA2A-203ENST00000448549 LGALS3BPQ08380 585 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 BNIP2Q12982 314 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 STX3Q13277 289 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 MPP2Q14168 576 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 GGTLC2Q14390 218 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 MAPK11Q15759 364 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 TMEM225Q6GV28 225 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 OGFOD2Q6N063 350 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 VRK2Q86Y07 508 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 PEX5LQ8IYB4 626 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 ZNF440Q8IYI8 595 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 CADM2Q8N3J6 435 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 OR52P1PQ8NH57 321 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 TRIM44Q96DX7 344 aaPredicted RBP13.55□□□□□ -0.24
TRA2A-203ENST00000448549 SORCS2Q96PQ0 1159 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 SSU72Q9NP77 194 aaKnown RBP13.55□□□□□ -0.24
TRA2A-203ENST00000448549 AIG1Q9NVV5 245 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 TMEM45AQ9NWC5 275 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 ADPRHL2Q9NX46 363 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 LPAR3Q9UBY5 353 aa13.55□□□□□ -0.24
TRA2A-203ENST00000448549 IGHV1-18A0A0C4DH31 117 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 CDHR4A6H8M9 788 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 VWC2LB2RUY7 222 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 TM9SF1O15321 606 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 LGI1O95970 557 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 SERPINF1P36955 418 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 ACAA2P42765 397 aaKnown RBP13.54□□□□□ -0.24
TRA2A-203ENST00000448549 SELENOPP49908 381 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 PDLIM4P50479 330 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 CARTPTQ16568 116 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 TBRG1Q3YBR2 411 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 ZNF836Q6ZNA1 936 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 ABHD12BQ7Z5M8 362 aaPredicted RBP13.54□□□□□ -0.24
TRA2A-203ENST00000448549 KIRREL3Q8IZU9 778 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 C3orf49Q96BT1 292 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 BOD1Q96IK1 185 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 TAPBPLQ9BX59 468 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 WDR55Q9H6Y2 383 aaPredicted RBP13.54□□□□□ -0.24
TRA2A-203ENST00000448549 OBP2BQ9NPH6 170 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 SLC6A13Q9NSD5 602 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 GPR45Q9Y5Y3 372 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 FKBP7Q9Y680 259 aa13.54□□□□□ -0.24
TRA2A-203ENST00000448549 SLC35F4A4IF30 521 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 A8MVM7 634 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 ZNF587BE7ETH6 402 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 NR5A2O00482 541 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 SDHDO14521 159 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 KRT75O95678 551 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 PRG2P13727 222 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 IGFBP5P24593 272 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 NR4A2P43354 598 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 GZMKP49863 264 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 P2RY4P51582 365 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 COPZ1P61923 177 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 SNRPD2P62316 118 aaKnown RBP13.53□□□□□ -0.24
TRA2A-203ENST00000448549 LRRC74AQ0VAA2 488 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 BST1Q10588 318 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 KRTAP24-1Q3LI83 254 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 WBP2NLQ6ICG8 309 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 CREB3L2Q70SY1 520 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 SLC46A3Q7Z3Q1 461 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 SPATA19Q7Z5L4 167 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 ANKS4BQ8N8V4 417 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 OR1K1Q8NGR3 316 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 FOXN4Q96NZ1 517 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 ALKBH3Q96Q83 286 aaPredicted RBP13.53□□□□□ -0.24
TRA2A-203ENST00000448549 SLC38A2Q96QD8 506 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 ZBTB18Q99592 522 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 VRK1Q99986 396 aaPredicted RBP13.53□□□□□ -0.24
TRA2A-203ENST00000448549 KCNS3Q9BQ31 491 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 PIMREGQ9BSJ6 248 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 PRR14Q9BWN1 585 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 PIF1Q9H611 641 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 CHODLQ9H9P2 273 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 KCNK9Q9NPC2 374 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 CA10Q9NS85 328 aa13.53□□□□□ -0.24
TRA2A-203ENST00000448549 A0A096LPE4 126 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 LOC100289279A0A1B0GTE1 492 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 A0A1W2PPZ6 126 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 NDUFS8O00217 210 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 RFXANKO14593 260 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 UPK3AO75631 287 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 VAMP5O95183 116 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 CRYAAP02489 173 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 ETFAP13804 333 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 NCF2P19878 526 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms