RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 OR2T6Q8NHC8 308 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 TVP23CQ96ET8 276 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 CAMK2AQ9UQM7 478 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 PLA2R1Q13018 1463 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 KIF13AQ9H1H9 1805 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 CDRT15L2A8MXV6 281 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF264O43296 627 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 GLCEO94923 617 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 PMS2P2O95744 297 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 GALTP07902 379 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SERTAD2Q14140 314 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 GRM7Q14831 915 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SPANXN4Q5MJ08 99 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 DHRS13Q6UX07 377 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 TECPR1Q7Z6L1 1165 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SERINC5Q86VE9 423 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SLC15A4Q8N697 577 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SCARB1Q8WTV0 552 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 FAM71F1Q96KD3 344 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 GPR20Q99678 358 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 OSMP13725 252 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 INCA1Q0VD86 236 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SRSF9Q13242 221 aaKnown RBP eCLIP8.39□□□□□ -1.072e-6■■■■□ 20.8
NIPBL-202ENST00000448238 HLXQ14774 488 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 OPN5Q6U736 354 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ENDOVQ8N8Q3 282 aaKnown RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 CLEC1AQ8NC01 280 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 OR13F1Q8NGS4 319 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 OR13D1Q8NGV5 346 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF382Q96SR6 550 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 NXF5Q9H1B4 397 aaKnown RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 FBXO8Q9NRD0 319 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 TMEM2Q9UHN6 1383 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 TMEM212A6NML5 194 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 A8MU76 341 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 DUX1O43812 170 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 LYZL6O75951 148 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 GATMP50440 423 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 LTBQ06643 244 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 OR2F1Q13607 317 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ELOCQ15369 112 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 MANEALQ5VSG8 457 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 PLAG1Q6DJT9 500 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 MMP28Q9H239 520 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 NKX6-3A6NJ46 265 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 BET1O15155 118 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 LGALS2P05162 132 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 DUSP1P28562 367 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 OR2T2Q6IF00 324 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 LINGO4Q6UY18 593 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SECTM1Q8WVN6 248 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 BCL2L2Q92843 193 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 DVL3Q92997 716 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 EMID1Q96A84 441 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 A2ML1A8K2U0 1454 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 ABCA4P78363 2273 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 TAS2R40P59535 323 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 KHDC1LQ5JSQ8 128 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 AGTRAPQ6RW13 159 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 CDC20BQ86Y33 519 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 CIB3Q96Q77 187 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 RSG1Q9BU20 258 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 BARHL1Q9BZE3 327 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 METTL9Q9H1A3 318 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 HES4Q9HCC6 221 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 GIMAP2Q9UG22 337 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 SUSD2Q9UGT4 822 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 SPO11Q9Y5K1 396 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 BMP5P22003 454 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 GPR4P46093 362 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 KEAP1Q14145 624 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 IGFN1Q86VF2 1251 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 TMEM217Q8N7C4 229 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 DTX3Q8N9I9 347 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 MRAP2Q96G30 205 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 C1orf74Q96LT6 269 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 DNMT3BQ9UBC3 853 aaKnown RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 CD207Q9UJ71 328 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 SLC35A3Q9Y2D2 325 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 OR1A2Q9Y585 309 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 RALGAPA1Q6GYQ0 2036 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 FZD7O75084 574 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 IL5P05113 134 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 TPOP07202 933 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 CTXN2P0C2S0 81 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 FXNQ16595 210 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF776Q68DI1 518 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF534Q76KX8 674 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 RETREG3Q86VR2 466 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 ADAMTS16Q8TE57 1224 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 GABARAPL1Q9H0R8 117 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 DMRT3Q9NQL9 472 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 FBXL12Q9NXK8 326 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 DNMT1P26358 1616 aaKnown RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 SPATA31C1P0DKV0 1188 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 ADRA2CP18825 462 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 CSNK1A1P48729 337 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 ERVFC1-1P60608 527 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 PAX5Q02548 391 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms