RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ZFP82Q8N141 532 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 NLGN4YQ8NFZ3 816 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-204ENST00000448183 OR56B1Q8NGI3 324 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 RNF141Q8WVD5 230 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 PHYHIPQ92561 330 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TMEM106AQ96A25 262 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 RSPRY1Q96DX4 576 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SEC22AQ96IW7 307 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 HHIPL1Q96JK4 782 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ARPC5LQ9BPX5 153 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 CMSS1Q9BQ75 279 aaKnown RBP7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF286AQ9HBT8 521 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 CUTCQ9NTM9 273 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 D6RAR5 112 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 MSTNO14793 375 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 CSO75390 466 aaKnown RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 CPNE6O95741 557 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 SMIM18P0DKX4 95 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 HOXA9P31269 272 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 PIGAP37287 484 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 TGM4P49221 684 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 MBOAT2Q6ZWT7 520 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 MCATQ8IVS2 390 aaKnown RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 RSC1A1Q92681 617 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 RBPMSQ93062 196 aaKnown RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 RBMXL1Q96E39 390 aaKnown RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 MED30Q96HR3 178 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 RADILQ96JH8 1075 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF578Q96N58 590 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 TIMM29Q9BSF4 260 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ALG12Q9BV10 488 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 KATNB1Q9BVA0 655 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 C8orf33Q9H7E9 229 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 MED20Q9H944 212 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 NTN4Q9HB63 628 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 SIDT1Q9NXL6 827 aaKnown RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 FTSJ1Q9UET6 329 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 SNX11Q9Y5W9 270 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 PUS1Q9Y606 427 aaKnown RBP eCLIP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 PIAS3Q9Y6X2 628 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 COL2A1P02458 1487 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 MDFIC2A0A1B0GVS7 189 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 E9PI62 339 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 SYT5O00445 386 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 AIFM1O95831 613 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 LALBAP00709 142 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 IGHG1P01857 330 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 HBE1P02100 147 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 F13BP05160 661 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF44P15621 663 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 GPX2P18283 190 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 PSMB5P28074 263 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 HTR2CP28335 458 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 APLNRP35414 380 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 POU3F1Q03052 451 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 SRYQ05066 204 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 MSMO1Q15800 293 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 SLX4IPQ5VYV7 408 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 B3GLCTQ6Y288 498 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 CADM3Q8N126 398 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 PXT1Q8NFP0 134 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 SDHAF2Q9NX18 166 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 GNG13Q9P2W3 67 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 LHX3Q9UBR4 397 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 DNAJC25-GNG10A0A024R161 153 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ADAM23O75077 832 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF217O75362 1048 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 CHRM4P08173 479 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 FURINP09958 794 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 CD79AP11912 226 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 HTR1FP30939 366 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 AVPI1Q5T686 147 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 CD276Q5ZPR3 534 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 TBPL2Q6SJ96 375 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 FBXW12Q6X9E4 464 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF765Q7L2R6 523 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF808Q8N4W9 903 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 OR52N1Q8NH53 320 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 IL1F10Q8WWZ1 152 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 TAAR8Q969N4 342 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ISL2Q96A47 359 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 SLC39A13Q96H72 371 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 OCSTAMPQ9BR26 566 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 TMEM59Q9BXS4 323 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 SLCO5A1Q9H2Y9 848 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 HAO2Q9NYQ3 351 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 NPFFR2Q9Y5X5 522 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 CCDC163A0A0D9SF12 145 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 BLACEA4D250 179 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ARGFXA6NJG6 315 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ADAMTS4O75173 837 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ATP1B1P05026 303 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 GNB3P16520 340 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 RAB4AP20338 218 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 ELAVL4P26378 380 aaKnown RBP7.24□□□□□ -1.25
NEDD9-204ENST00000448183 PTBP1P26599 531 aaKnown RBP eCLIP7.24□□□□□ -1.257e-8■■■□□ 15.6
NEDD9-204ENST00000448183 IMPA1P29218 277 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 HOXC13P31276 330 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 OTX2P32243 289 aa7.24□□□□□ -1.25
NEDD9-204ENST00000448183 BMPR1AP36894 532 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms