RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 TRAPPC4Q9Y296 219 aa12.63□□□□□ -0.39
SREBF1-207ENST00000447641 HDGFL3Q9Y3E1 203 aa12.63□□□□□ -0.39
SREBF1-207ENST00000447641 SPIN1Q9Y657 262 aaPredicted RBP12.63□□□□□ -0.39
SREBF1-207ENST00000447641 A0A1W2PNR3 127 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 A0A1W2PNV4 684 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 ZC3H12DA2A288 527 aaKnown RBP12.62□□□□□ -0.39
SREBF1-207ENST00000447641 SYNGR4O95473 234 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 PMS2P2O95744 297 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 SERPINA1P01009 418 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 NCK1P16333 377 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 KIR2DL2P43627 348 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-207ENST00000447641 DIO1P49895 249 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 AGFG1P52594 562 aaKnown RBP12.62□□□□□ -0.39
SREBF1-207ENST00000447641 RGS8P57771 180 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-207ENST00000447641 MYBPHQ13203 477 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 NPTX1Q15818 432 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 FBXL19-AS1Q494R0 122 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 LRRC23Q53EV4 343 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-207ENST00000447641 OR4D11Q8NGI4 311 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 OR6T1Q8NGN1 323 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 RNF128Q8TEB7 428 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 DNAJA4Q8WW22 397 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-207ENST00000447641 SLC47A1Q96FL8 570 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 OR11A1Q9GZK7 315 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 KCNJ16Q9NPI9 418 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 GLRX2Q9NS18 164 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 SLC13A4Q9UKG4 626 aa12.62□□□□□ -0.39
SREBF1-207ENST00000447641 MCTS1Q9ULC4 181 aaKnown RBP12.62□□□□□ -0.39
SREBF1-207ENST00000447641 NIPBLQ6KC79 2804 aaeCLIP12.62□□□□□ -0.39
SREBF1-207ENST00000447641 A0A1B0GWA3 101 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 M0R3H8 397 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 DVL2O14641 736 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 DNPH1O43598 174 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 ZNF682O95780 498 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 CGAP01215 116 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 IGFBP2P18065 325 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 BMP5P22003 454 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 CXCR1P25024 350 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 ARHGDIAP52565 204 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 H3F3AP84243 136 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 GK3PQ14409 553 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 CYBRD1Q53TN4 286 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 ULK3Q6PHR2 472 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 LINC00114Q6XXX2 140 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 CBLL1Q75N03 491 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 P4HA3Q7Z4N8 544 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 ADGRG5Q8IZF4 528 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 GCNT2Q8N0V5 402 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 CANT1Q8WVQ1 401 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 ROBO4Q8WZ75 1007 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 SLC38A4Q969I6 547 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 DDIT4LQ96D03 193 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 CENPNQ96H22 339 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-207ENST00000447641 GMPPAQ96IJ6 420 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-207ENST00000447641 OSBPL10Q9BXB5 764 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 GP6Q9HCN6 339 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 CHST11Q9NPF2 352 aa12.61□□□□□ -0.39
SREBF1-207ENST00000447641 NPDC1Q9NQX5 325 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-207ENST00000447641 ING1Q9UK53 422 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-207ENST00000447641 A0A0B4J2E0 115 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 A0A1B0GX12 115 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 TCRBV5S2A0A599 114 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 NKX2-6A6NCS4 301 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 A8MVM7 634 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 SULT2B1O00204 365 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 CASQ2O14958 399 aaPredicted RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 SMAD9O15198 467 aaKnown RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 CYTIPO60759 359 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 FZD7O75084 574 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 SS18L1O75177 396 aaPredicted RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 LYPD3O95274 346 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 TFPIP10646 304 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 PNMTP11086 282 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 IMPDH2P12268 514 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 COX6B1P14854 86 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 CCNA2P20248 432 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 ENPP1P22413 925 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 IFNA8P32881 189 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 PTDSS1P48651 473 aaKnown RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 HSPA13P48723 471 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 SELENOWP63302 87 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 CSNK2A1P68400 391 aaPredicted RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 EGR4Q05215 589 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 RNPS1Q15287 305 aaKnown RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 OR1Q1Q15612 314 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 SWT1Q5T5J6 900 aaKnown RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 GTF2IRD2BQ6EKJ0 949 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 ZNF613Q6PF04 617 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 FCRLAQ7L513 359 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 BTLAQ7Z6A9 289 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 GTF2IRD2Q86UP8 949 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 RANBP3LQ86VV4 465 aaPredicted RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 TSPYL5Q86VY4 417 aaPredicted RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 LSRQ86X29 649 aaPredicted RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 RBM45Q8IUH3 476 aaKnown RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 SLC43A2Q8N370 569 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 STK35Q8TDR2 534 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 GEMIN6Q8WXD5 167 aaKnown RBP12.6□□□□□ -0.39
SREBF1-207ENST00000447641 PROX1Q92786 737 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms