RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 TMEM88Q6PEY1 159 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CD300LDQ6UXZ3 194 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZNF813Q6ZN06 617 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NPAS4Q8IUM7 802 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 LRRC18Q8N456 261 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 STXBP6Q8NFX7 210 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 OR52P1PQ8NH57 321 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NUDCD2Q8WVJ2 157 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 KIRREL1Q96J84 757 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SLC25A51Q9H1U9 297 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ALG9Q9H6U8 611 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ACP6Q9NPH0 428 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SLC35D1Q9NTN3 355 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 DOK5Q9P104 306 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NDOR1Q9UHB4 597 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 AK6Q9Y3D8 172 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 ECM29Q5VYK3 1845 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TRAV19A0A0A6YYK7 116 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SERPINE3A8MV23 424 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SULT2B1O00204 365 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 POMCP01189 267 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZNF286BP0CG31 522 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CELP19835 753 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 RAB6AP20340 208 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CD34P28906 385 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SH3BP2P78314 561 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SLC25A11Q02978 314 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 NFATC2Q13469 925 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CLINT1Q14677 625 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NKX1-1Q15270 411 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 PCBP2Q15366 365 aaKnown RBP eCLIP2.72□□□□□ -1.973e-7■■■■■ 36.8
CHD9-203ENST00000447540 FAM98CQ17RN3 349 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 UBE2NLQ5JXB2 153 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 LIPKQ5VXJ0 399 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 USP17L2Q6R6M4 530 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 RAVER1Q8IY67 606 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 JAGN1Q8N5M9 183 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CELF5Q8N6W0 485 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 OR4F15Q8NGB8 312 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 RASD2Q96D21 266 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZNF583Q96ND8 569 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TSSK6Q9BXA6 273 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TBL1XR1Q9BZK7 514 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 HEXA-AS1Q9H8Q6 139 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TUBG2Q9NRH3 451 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TMPRSS4Q9NRS4 437 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TMEM242Q9NWH2 141 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 PHLPP1O60346 1717 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NUP188Q5SRE5 1749 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 COL1A2P08123 1366 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 C2CD4BA6NLJ0 364 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 DHRS7CA6NNS2 312 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SLC33A1O00400 549 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 CYB5BO43169 146 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SIAH2O43255 324 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TSPAN6O43657 245 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 GRIN3BO60391 1043 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NDUFS6O75380 124 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 HTR1AP08908 422 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 OR8G3PP0DMU2 310 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CLK2P49760 499 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 POLR2HP52434 150 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 ELLP55199 621 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZNF235Q14590 738 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 VAMP3Q15836 100 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 PMCHL1Q16048 86 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SCGB2B2Q4G0G5 96 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 HECTD2Q5U5R9 776 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 OR2T2Q6IF00 324 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 MRM1Q6IN84 353 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 CD200R1LQ6Q8B3 271 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 OVCH1Q7RTY7 1134 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 OLIG1Q8TAK6 271 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 LKAAEAR1Q8TD35 194 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NETO1Q8TDF5 533 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TSEN15Q8WW01 171 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 ADIPOR1Q96A54 375 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ADAD1Q96M93 576 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 PWWP2AQ96N64 755 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ACPTQ9BZG2 426 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZDHHC11Q9H8X9 412 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SLC2A6Q9UGQ3 507 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SUSD2Q9UGT4 822 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZFP37Q9Y6Q3 630 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 HEATR5BQ9P2D3 2071 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 LOC102723532A0A0G2JNH3 316 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ARPC1BO15143 372 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 CD1AP06126 327 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NME1P15531 152 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 FCARP24071 287 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SSTR2P30874 369 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 MPIP34949 423 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CHI3L1P36222 383 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 AVPR1BP47901 424 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ERVFRD-1P60508 538 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 GANABQ14697 944 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 PSG3Q16557 428 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 QRICH1Q2TAL8 776 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 C10orf91Q5T1B1 145 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SUSD1Q6UWL2 747 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms