RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 PHC2Q8IXK0 858 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 CADM2Q8N3J6 435 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 OR9K2Q8NGE7 335 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 OR52P1PQ8NH57 321 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 TMEM45BQ96B21 275 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 KCNK17Q96T54 332 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 SF3B5Q9BWJ5 86 aaKnown RBP13.5□□□□□ -0.25
SEC13-213ENST00000445064 PARD6BQ9BYG5 372 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 PMF1-BGLAPU3KQ54 211 aa13.5□□□□□ -0.25
SEC13-213ENST00000445064 CDHR4A6H8M9 788 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 AQP7P3A6NL99 342 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 RFXANKO14593 260 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 KRT33AO76009 404 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 KRT75O95678 551 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 WNT11O96014 354 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 KITP10721 976 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 BMP4P12644 408 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 PRG2P13727 222 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 ETFAP13804 333 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 CRATP43155 626 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 MVDP53602 400 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 VLDLRP98155 873 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 LGALS3BPQ08380 585 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 LRRC74AQ0VAA2 488 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 MST1LQ2TV78 715 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 TNFAIP8L3Q5GJ75 292 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 CEP85LQ5SZL2 805 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 ZNF440Q8IYI8 595 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 CLIP4Q8N3C7 705 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 ANKRD42Q8N9B4 389 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 POMGNT2Q8NAT1 580 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 C10orf105Q8TEF2 133 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 FBXO17Q96EF6 278 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 ZBTB18Q99592 522 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 ADPRHL2Q9NX46 363 aa13.49□□□□□ -0.25
SEC13-213ENST00000445064 ANK3Q12955 4377 aaKnown RBP13.48□□□□□ -0.25
SEC13-213ENST00000445064 HEATR1Q9H583 2144 aaKnown RBP13.48□□□□□ -0.25
SEC13-213ENST00000445064 A8MVM7 634 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 HDAC3O15379 428 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 F12P00748 615 aaPredicted RBP13.48□□□□□ -0.25
SEC13-213ENST00000445064 BCHEP06276 602 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 TFPTP0C1Z6 253 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 SELENOPP49908 381 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 SWI5Q1ZZU3 235 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 HHATQ5VTY9 493 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 CYB5R2Q6BCY4 276 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 NXNQ6DKJ4 435 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 WBP2NLQ6ICG8 309 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 KLHL24Q6TFL4 600 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 CREB3L2Q70SY1 520 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 PROX1Q92786 737 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 TAPBPLQ9BX59 468 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 TMEM45AQ9NWC5 275 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 P2RX2Q9UBL9 471 aa13.48□□□□□ -0.25
SEC13-213ENST00000445064 YLPM1P49750 1951 aaKnown RBP13.48□□□□□ -0.25
SEC13-213ENST00000445064 SONP18583 2426 aaKnown RBP13.48□□□□□ -0.25
SEC13-213ENST00000445064 DSPPQ9NZW4 1301 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 IGHV1-18A0A0C4DH31 117 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 NR5A2O00482 541 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 SLC22A3O75751 556 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 ANP32DO95626 131 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 LGI1O95970 557 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 IL6P05231 212 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 FAM157CP0CG43 387 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 IGHV4-31P0DP07 118 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 USF1P22415 310 aaPredicted RBP13.47□□□□□ -0.25
SEC13-213ENST00000445064 P2RY4P51582 365 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 WDR4P57081 412 aaKnown RBP13.47□□□□□ -0.25
SEC13-213ENST00000445064 COPZ1P61923 177 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 LSM11P83369 360 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEC13-213ENST00000445064 GTDC1Q4AE62 458 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 LIN52Q52LA3 116 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 RPS26P11Q5JNZ5 115 aaPredicted RBP13.47□□□□□ -0.25
SEC13-213ENST00000445064 ABHD12BQ7Z5M8 362 aaPredicted RBP13.47□□□□□ -0.25
SEC13-213ENST00000445064 GLB1L3Q8NCI6 653 aaPredicted RBP13.47□□□□□ -0.25
SEC13-213ENST00000445064 SLC38A5Q8WUX1 472 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 TMEM158Q8WZ71 300 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 BOD1Q96IK1 185 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 BEX2Q9BXY8 128 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 PIF1Q9H611 641 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 THAP1Q9NVV9 213 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 CDC42EP3Q9UKI2 254 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 ZNF232Q9UNY5 417 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 ZNF443Q9Y2A4 671 aaPredicted RBP13.47□□□□□ -0.25
SEC13-213ENST00000445064 CHST2Q9Y4C5 530 aa13.47□□□□□ -0.25
SEC13-213ENST00000445064 TRPC5OSA6NMA1 111 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 NCF2P19878 526 aaPredicted RBP13.46□□□□□ -0.25
SEC13-213ENST00000445064 CRISP3P54108 245 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 DSTNP60981 165 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 TBRG1Q3YBR2 411 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
SEC13-213ENST00000445064 C1QTNF12Q5T7M4 302 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 C1orf140Q5VVS0 124 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 NIPAL3Q6P499 406 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 LINGO2Q7L985 606 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 EPHX4Q8IUS5 362 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 KDM8Q8N371 416 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 ARIH2OSQ8N7S6 290 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 OR1K1Q8NGR3 316 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 MGARPQ8TDB4 240 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms