RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 OR52N5Q8NH56 324 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 SF3B5Q9BWJ5 86 aaKnown RBP17.7■□□□□ 0.42
LRCH3-208ENST00000443727 GSX2Q9BZM3 304 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 TRBV5-3A0A0A0MS03 114 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 PRORSD1PA6NEY8 169 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 TMCC2O75069 709 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 SERPINB7O75635 380 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 SASH3O75995 380 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 KRT33AO76009 404 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 GPX2P18283 190 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 AQP1P29972 269 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 NCALDP61601 193 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 TGFBR3Q03167 851 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 C9orf135Q5VTT2 229 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 KLHL17Q6TDP4 642 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 PRSS57Q6UWY2 283 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 DHDDSQ86SQ9 333 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 KBTBD8Q8NFY9 601 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 STK35Q8TDR2 534 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 SLC25A36Q96CQ1 311 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 Q96MF0 132 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 GSX1Q9H4S2 264 aaPredicted RBP17.69■□□□□ 0.42
LRCH3-208ENST00000443727 IKZF5Q9H5V7 419 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 TMEM38AQ9H6F2 299 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 SELENONQ9NZV5 590 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 ANGPT4Q9Y264 503 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 GMEB1Q9Y692 573 aa17.69■□□□□ 0.42
LRCH3-208ENST00000443727 A0A1W2PR80 420 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 INHBBP09529 407 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 ZNF83P51522 516 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 RPS4XP62701 263 aaKnown RBP17.68■□□□□ 0.42
LRCH3-208ENST00000443727 CYP51A1Q16850 503 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 ZNF672Q499Z4 452 aaPredicted RBP17.68■□□□□ 0.42
LRCH3-208ENST00000443727 DHRS4L2Q6PKH6 230 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 SEZ6L2Q6UXD5 910 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 TMEM108Q6UXF1 575 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 DLEU7Q6UYE1 221 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 BIVMQ86UB2 503 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 HIPK4Q8NE63 616 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 LILRB1Q8NHL6 650 aaPredicted RBP17.68■□□□□ 0.42
LRCH3-208ENST00000443727 RNF217Q8TC41 542 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 SMAP2Q8WU79 429 aaPredicted RBP17.68■□□□□ 0.42
LRCH3-208ENST00000443727 NEUROG1Q92886 237 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 GTPBP3Q969Y2 492 aaKnown RBP17.68■□□□□ 0.42
LRCH3-208ENST00000443727 TMEM45BQ96B21 275 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 CPPED1Q9BRF8 314 aaPredicted RBP17.68■□□□□ 0.42
LRCH3-208ENST00000443727 TRIM2Q9C040 744 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 SLC7A10Q9NS82 523 aa17.68■□□□□ 0.42
LRCH3-208ENST00000443727 TMEM229AB2RXF0 380 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 ABCD4O14678 606 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 VAMP5O95183 116 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 ITGA5P08648 1049 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 RPS5P46782 204 aaKnown RBP17.67■□□□□ 0.42
LRCH3-208ENST00000443727 ATP5J2P56134 94 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 RGS8P57771 180 aaPredicted RBP17.67■□□□□ 0.42
LRCH3-208ENST00000443727 NFYCQ13952 458 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 RUNDC3AQ59EK9 446 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 TSPO2Q5TGU0 170 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 ARMC8Q8IUR7 673 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 BHLHE22Q8NFJ8 381 aaPredicted RBP17.67■□□□□ 0.42
LRCH3-208ENST00000443727 MFSD8Q8NHS3 518 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 DNAJA4Q8WW22 397 aaPredicted RBP17.67■□□□□ 0.42
LRCH3-208ENST00000443727 ZNF385AQ96PM9 386 aaKnown RBP17.67■□□□□ 0.42
LRCH3-208ENST00000443727 BDH2Q9BUT1 245 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 PIF1Q9H611 641 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 NPAP1Q9NZP6 1156 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 RASD1Q9Y272 281 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 NF1P21359 2839 aa17.67■□□□□ 0.42
LRCH3-208ENST00000443727 RAI1Q7Z5J4 1906 aaPredicted RBP17.66■□□□□ 0.42
LRCH3-208ENST00000443727 ZNF469Q96JG9 3925 aaPredicted RBP17.66■□□□□ 0.42
LRCH3-208ENST00000443727 A0A1B0GWA3 101 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 TPST1O60507 370 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 NPIPB7O75200 414 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 PNMTP11086 282 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 CDH2P19022 906 aaPredicted RBP17.66■□□□□ 0.42
LRCH3-208ENST00000443727 CDH11P55287 796 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 FOXG1P55316 489 aaPredicted RBP17.66■□□□□ 0.42
LRCH3-208ENST00000443727 ADRM1Q16186 407 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 GABRA6Q16445 453 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 ALG10BQ5I7T1 473 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 ABHD12BQ7Z5M8 362 aaPredicted RBP17.66■□□□□ 0.42
LRCH3-208ENST00000443727 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
LRCH3-208ENST00000443727 DPP10Q8N608 796 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 ZIC4Q8N9L1 334 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 POMGNT2Q8NAT1 580 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 C11orf65Q8NCR3 313 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 IGFBPL1Q8WX77 278 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 KTI12Q96EK9 354 aaPredicted RBP17.66■□□□□ 0.42
LRCH3-208ENST00000443727 RADILQ96JH8 1075 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 ANKRD27Q96NW4 1050 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 MUS81Q96NY9 551 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 CGREF1Q99674 301 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 SLCO5A1Q9H2Y9 848 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 ZNF385DQ9H6B1 395 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 C12orf10Q9HB07 376 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 TMEM27Q9HBJ8 222 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 ZNF701Q9NV72 531 aaPredicted RBP17.66■□□□□ 0.42
LRCH3-208ENST00000443727 FAIMQ9NVQ4 179 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 CISD1Q9NZ45 108 aaKnown RBP17.66■□□□□ 0.42
LRCH3-208ENST00000443727 POU2F3Q9UKI9 436 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms