RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 ESRP2Q9H6T0 727 aaKnown RBP18.59■□□□□ 0.57
CDKN3-204ENST00000442975 KAT8Q9H7Z6 458 aaKnown RBP18.59■□□□□ 0.57
CDKN3-204ENST00000442975 MRGBPQ9NV56 204 aa18.59■□□□□ 0.57
CDKN3-204ENST00000442975 UPB1Q9UBR1 384 aa18.59■□□□□ 0.57
CDKN3-204ENST00000442975 MALT1Q9UDY8 824 aa18.59■□□□□ 0.57
CDKN3-204ENST00000442975 RNF115Q9Y4L5 304 aa18.59■□□□□ 0.57
CDKN3-204ENST00000442975 M0R3H8 397 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 FBP2O00757 339 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 NPIPB7O75200 414 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 DMTNQ08495 405 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 KLF10Q13118 480 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 PPA1Q15181 289 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 MAPRE2Q15555 327 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 REP15Q6BDI9 236 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 TMEM225Q6GV28 225 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 RANBP3LQ86VV4 465 aaPredicted RBP18.58■□□□□ 0.56
CDKN3-204ENST00000442975 SNX32Q86XE0 403 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 TGIF2LYQ8IUE0 185 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 P3H2Q8IVL5 708 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 BHLHE22Q8NFJ8 381 aaPredicted RBP18.58■□□□□ 0.56
CDKN3-204ENST00000442975 OR10A6Q8NH74 314 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 PIGTQ969N2 578 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 KTI12Q96EK9 354 aaPredicted RBP18.58■□□□□ 0.56
CDKN3-204ENST00000442975 SAR1AQ9NR31 198 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 PARPBPQ9NWS1 579 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 TAS2R16Q9NYV7 291 aa18.58■□□□□ 0.56
CDKN3-204ENST00000442975 MRASO14807 208 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 SMPD2O60906 423 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 MFN2O95140 757 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 CD3EP07766 207 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 PNMTP11086 282 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 PTNP21246 168 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 PCGF2P35227 344 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 PCBP3P57721 371 aaKnown RBP18.57■□□□□ 0.56
CDKN3-204ENST00000442975 CYLC2Q14093 348 aaPredicted RBP18.57■□□□□ 0.56
CDKN3-204ENST00000442975 RABL3Q5HYI8 236 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 C6orf89Q6UWU4 347 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 AAED1Q7RTV5 226 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 ZNF433Q8N7K0 673 aaPredicted RBP18.57■□□□□ 0.56
CDKN3-204ENST00000442975 LSMEM1Q8N8F7 131 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 DNAJA4Q8WW22 397 aaPredicted RBP18.57■□□□□ 0.56
CDKN3-204ENST00000442975 AKAP1Q92667 903 aaKnown RBP eCLIP18.57■□□□□ 0.56
CDKN3-204ENST00000442975 ZNF385AQ96PM9 386 aaKnown RBP18.57■□□□□ 0.56
CDKN3-204ENST00000442975 PTDSS2Q9BVG9 487 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 SF3B5Q9BWJ5 86 aaKnown RBP18.57■□□□□ 0.56
CDKN3-204ENST00000442975 CCDC134Q9H6E4 229 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 TMEM27Q9HBJ8 222 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 ITPR3Q14573 2671 aa18.57■□□□□ 0.56
CDKN3-204ENST00000442975 OR5H1A6NKK0 313 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 CD99P14209 185 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 EGR4Q05215 589 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 BSPH1Q075Z2 132 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 FOXD4Q12950 439 aaPredicted RBP18.56■□□□□ 0.56
CDKN3-204ENST00000442975 TIMM23BQ5SRD1 257 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 TSPO2Q5TGU0 170 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 ADAM5Q6NVV9 412 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 SEZ6L2Q6UXD5 910 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 NET1Q7Z628 596 aaPredicted RBP18.56■□□□□ 0.56
CDKN3-204ENST00000442975 SLC30A8Q8IWU4 369 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 WFDC11Q8NEX6 87 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 OR52N5Q8NH56 324 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 MFSD8Q8NHS3 518 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 TMEM45BQ96B21 275 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 TMEM204Q9BSN7 226 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 C12orf10Q9HB07 376 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 SLC7A10Q9NS82 523 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 KLHL14Q9P2G3 628 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 CAPN7Q9Y6W3 813 aa18.56■□□□□ 0.56
CDKN3-204ENST00000442975 IGKV1D-42A0A075B6H8 117 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 A0A1W2PR80 420 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 BBIP1A8MTZ0 92 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 FTCDNL1E5RQL4 147 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 M0QX08 132 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 FXYD1O00168 92 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 HS3ST1O14792 307 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 KRT33AO76009 404 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 ITGA5P08648 1049 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 MDH1P40925 334 aaKnown RBP18.55■□□□□ 0.56
CDKN3-204ENST00000442975 P2RY4P51582 365 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 FOXG1P55316 489 aaPredicted RBP18.55■□□□□ 0.56
CDKN3-204ENST00000442975 ADAM8P78325 824 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 IL1RL1Q01638 556 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 OR1Q1Q15612 314 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 NCMAPQ5T1S8 102 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 ULK3Q6PHR2 472 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 PATL1Q86TB9 770 aaKnown RBP18.55■□□□□ 0.56
CDKN3-204ENST00000442975 KBTBD8Q8NFY9 601 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 SLC26A7Q8TE54 656 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 SLC38A4Q969I6 547 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 LRRC58Q96CX6 371 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 SLC47A1Q96FL8 570 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 PERPQ96FX8 193 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 WFDC6Q9BQY6 131 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 ARMCX1Q9P291 453 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 SEC14L4Q9UDX3 406 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 RASD1Q9Y272 281 aa18.55■□□□□ 0.56
CDKN3-204ENST00000442975 PRRC2AP48634 2157 aaKnown RBP18.55■□□□□ 0.56
CDKN3-204ENST00000442975 MAP1AP78559 2803 aaPredicted RBP18.55■□□□□ 0.56
CDKN3-204ENST00000442975 A0A0B4J2E0 115 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 LOC100653049A0A140TA62 436 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms