RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 FTCDNL1E5RQL4 147 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 TPST1O60507 370 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 FZD7O75084 574 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 RAD51DO75771 328 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 DANCRP0C864 163 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 HTR2AP28223 471 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 PTH2RP49190 550 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 GLIPR1L2Q4G1C9 344 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 C1orf140Q5VVS0 124 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 CASP12Q6UXS9 341 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 RETREG3Q86VR2 466 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 LSMEM1Q8N8F7 131 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 OR9K2Q8NGE7 335 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 NEUROG1Q92886 237 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 PERPQ96FX8 193 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 C18orf12Q96KH6 178 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 ZNF385AQ96PM9 386 aaKnown RBP16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 SIKE1Q9BRV8 207 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 PTDSS2Q9BVG9 487 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 TRIM2Q9C040 744 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 NPHS2Q9NP85 383 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 SLC7A10Q9NS82 523 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 PARPBPQ9NWS1 579 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 TAS2R16Q9NYV7 291 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 LEF1Q9UJU2 399 aaPredicted RBP16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 DCTN4Q9UJW0 460 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 CORO2BQ9UQ03 480 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 SLC25A15Q9Y619 301 aa16.65■□□□□ 0.26
HMGB3P22-201ENST00000442010 CLOCKO15516 846 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 FAPQ12884 760 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 SCARB2Q14108 478 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 GABRA6Q16445 453 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 ZNF672Q499Z4 452 aaPredicted RBP16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 TSPO2Q5TGU0 170 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 KBTBD8Q8NFY9 601 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 TSPEARQ8WU66 669 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 TMEM171Q8WVE6 324 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 MUCL1Q96DR8 90 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 C12orf10Q9HB07 376 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 NDUFAF1Q9Y375 327 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 NAV3Q8IVL0 2385 aa16.64■□□□□ 0.25
HMGB3P22-201ENST00000442010 EVPLLA8MZ36 301 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 SHISA9B4DS77 424 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 OVOL3O00110 214 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 SOD3P08294 240 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 SELPLGQ14242 412 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 YTHDF3Q7Z739 585 aaKnown RBP16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 DHDDSQ86SQ9 333 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 PTOV1Q86YD1 416 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 WDR31Q8NA23 367 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 MFSD8Q8NHS3 518 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 FBXW5Q969U6 566 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 ANKRD27Q96NW4 1050 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 WFDC6Q9BQY6 131 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 SPATA5L1Q9BVQ7 753 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 TAPBPLQ9BX59 468 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 ADPRHL2Q9NX46 363 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 TRIM33Q9UPN9 1127 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 LAMP3Q9UQV4 416 aa16.63■□□□□ 0.25
HMGB3P22-201ENST00000442010 TLN2Q9Y4G6 2542 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 CSPG4Q6UVK1 2322 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 A0A1B0GWA3 101 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 CIB4A0PJX0 185 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 TPST2O60704 377 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 VAMP5O95183 116 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 INHBBP09529 407 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 SLC6A2P23975 617 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 PCBP3P57721 371 aaKnown RBP16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 PGGHGQ32M88 737 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 METTL21CQ5VZV1 264 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 OR7E24Q6IFN5 339 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 BIVMQ86UB2 503 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 KRT73Q86Y46 540 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 EPHX4Q8IUS5 362 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 CIARTQ8N365 385 aaPredicted RBP16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 HIPK4Q8NE63 616 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 OR52N5Q8NH56 324 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 KTI12Q96EK9 354 aaPredicted RBP16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 Q96MF0 132 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 CGREF1Q99674 301 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 SMR3AQ99954 134 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 PRR14Q9BWN1 585 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 CXorf56Q9H5V9 222 aa16.62■□□□□ 0.25
HMGB3P22-201ENST00000442010 NIPBLQ6KC79 2804 aaeCLIP16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 NSD1Q96L73 2696 aaPredicted RBP16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 IGKV1D-42A0A075B6H8 117 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 A0A0G2JND7 137 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 A0A1W2PR80 420 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 CCT8L1PA6NM43 557 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 MFN2O95140 757 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 AHSA1O95433 338 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 PNMTP11086 282 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 DMTNQ08495 405 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 TMEM225Q6GV28 225 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 CREB3L2Q70SY1 520 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 AAED1Q7RTV5 226 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 GPAT4Q86UL3 456 aa16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 C1orf162Q8NEQ5 155 aaPredicted RBP16.61■□□□□ 0.25
HMGB3P22-201ENST00000442010 SMAP2Q8WU79 429 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms