RNA–Protein interactions for RNA: ENST00000441114.5

SHH-204, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-204ENST00000441114 EMC3Q9P0I2 261 aa16.58■□□□□ 0.24
SHH-204ENST00000441114 KCNN3Q9UGI6 736 aa16.58■□□□□ 0.24
SHH-204ENST00000441114 IGKV1D-42A0A075B6H8 117 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 A0A087WUJ7 227 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 ZNF724A8MTY0 619 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 TCN1P20061 433 aaPredicted RBP16.57■□□□□ 0.24
SHH-204ENST00000441114 SELENOWP63302 87 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 SORDQ00796 357 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 KRT72Q14CN4 511 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 ANKRD34AQ69YU3 496 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 TMEM225Q6GV28 225 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 PAQR6Q6TCH4 344 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 TFAP2EQ6VUC0 442 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 BEND4Q6ZU67 534 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 TSPYL5Q86VY4 417 aaPredicted RBP16.57■□□□□ 0.24
SHH-204ENST00000441114 ZNF100Q8IYN0 542 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 PGAM4Q8N0Y7 254 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 FAM156AQ8NDB6 213 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 MFSD8Q8NHS3 518 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 ADAMTS16Q8TE57 1224 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 LZICQ8WZA0 190 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 TAAR8Q969N4 342 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 NSL1Q96IY1 281 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 PTDSS2Q9BVG9 487 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 C6orf203Q9P0P8 240 aaPredicted RBP16.57■□□□□ 0.24
SHH-204ENST00000441114 PRSS50Q9UI38 385 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 SLC7A7Q9UM01 511 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 NOSIPQ9Y314 301 aaKnown RBP16.57■□□□□ 0.24
SHH-204ENST00000441114 CRYBG3Q68DQ2 2970 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 FREM1Q5H8C1 2179 aa16.57■□□□□ 0.24
SHH-204ENST00000441114 TRAPPC13A5PLN9 417 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 C16orf97H3BN30 126 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 SERPINA1P01009 418 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 THY1P04216 161 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 EDNRAP25101 427 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 SSTR2P30874 369 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 TAS2R41P59536 307 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 PDK3Q15120 406 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 C16orf89Q6UX73 402 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 GPAT4Q86UL3 456 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 DEFB107AQ8IZN7 70 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 C10orf53Q8N6V4 93 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 CDRT15Q96T59 188 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 NDRG3Q9UGV2 375 aa16.56■□□□□ 0.24
SHH-204ENST00000441114 TRAV36DV7A0A075B6V5 113 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 IGKV3D-15A0A087WSY6 115 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 SH3D21A4FU49 640 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 AQP7P3A6NL99 342 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 B2RBV5 119 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 GPR171O14626 319 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 CHP2O43745 196 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 GGT1P19440 569 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 MSX2P35548 267 aaPredicted RBP16.55■□□□□ 0.24
SHH-204ENST00000441114 UGT2B10P36537 528 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 OR3A2P47893 321 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 GLYATQ6IB77 296 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 TTC33Q6PID6 262 aaPredicted RBP16.55■□□□□ 0.24
SHH-204ENST00000441114 C5orf46Q6UWT4 87 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 VTCN1Q7Z7D3 282 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 CXorf67Q86X51 503 aaPredicted RBP16.55■□□□□ 0.24
SHH-204ENST00000441114 KDM8Q8N371 416 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 FAM222BQ8WU58 562 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 C14orf79Q96F83 325 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 SLC41A3Q96GZ6 507 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 ZC3HAV1LQ96H79 300 aaKnown RBP16.55■□□□□ 0.24
SHH-204ENST00000441114 EPYCQ99645 322 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 FANCFQ9NPI8 374 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 SEC14L4Q9UDX3 406 aa16.55■□□□□ 0.24
SHH-204ENST00000441114 FTCDNL1E5RQL4 147 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 OR2T1O43869 369 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 MRPL33O75394 65 aaKnown RBP16.54■□□□□ 0.24
SHH-204ENST00000441114 GMNNO75496 209 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 LYPD3O95274 346 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 ADAP00813 363 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 IGHV3-9P01782 118 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 EPXP11678 715 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 GRPRP30550 384 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 YAP1P46937 504 aaKnown RBP16.54■□□□□ 0.24
SHH-204ENST00000441114 MNAT1P51948 309 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 SLC16A1P53985 500 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 IL1RL1Q01638 556 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 PIN1Q13526 163 aaPredicted RBP16.54■□□□□ 0.24
SHH-204ENST00000441114 SLC17A1Q14916 467 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 TSC22D1Q15714 1073 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 SWT1Q5T5J6 900 aaKnown RBP16.54■□□□□ 0.24
SHH-204ENST00000441114 FAM69AQ5T7M9 428 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 CASP12Q6UXS9 341 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 WDR88Q6ZMY6 472 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 FKBP9P1Q75LS8 142 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 CBLL1Q75N03 491 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 TMEM200AQ86VY9 491 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 UBE2J2Q8N2K1 259 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 WFIKKN1Q96NZ8 548 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 PCDHAC1Q9H158 963 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 NDE1Q9NXR1 346 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 FLVCR1Q9Y5Y0 555 aa16.54■□□□□ 0.24
SHH-204ENST00000441114 LRRN3E7EW58 273 aa16.53■□□□□ 0.24
SHH-204ENST00000441114 M0R082 166 aa16.53■□□□□ 0.24
SHH-204ENST00000441114 KPNA4O00629 521 aaPredicted RBP16.53■□□□□ 0.24
SHH-204ENST00000441114 CASKO14936 926 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms