RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 ENAMQ9NRM1 1142 aa9.53□□□□□ -0.88
CPNE1-218ENST00000439806 ST6GALNAC2Q9UJ37 374 aa9.53□□□□□ -0.88
CPNE1-218ENST00000439806 ZMIZ1Q9ULJ6 1067 aa9.53□□□□□ -0.88
CPNE1-218ENST00000439806 PAIP2BQ9ULR5 123 aaKnown RBP9.53□□□□□ -0.88
CPNE1-218ENST00000439806 ADAM18Q9Y3Q7 739 aa9.53□□□□□ -0.88
CPNE1-218ENST00000439806 ABCA7Q8IZY2 2146 aa9.53□□□□□ -0.88
CPNE1-218ENST00000439806 A0A1W2PQD3 144 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 OR6C76A6NM76 312 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 DVL2O14641 736 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 IMPA2O14732 288 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 OGG1O15527 345 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 EIF4E2O60573 245 aaKnown RBP9.52□□□□□ -0.89
CPNE1-218ENST00000439806 SELENOFO60613 162 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 CPNE3O75131 537 aaKnown RBP9.52□□□□□ -0.89
CPNE1-218ENST00000439806 GLCEO94923 617 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 NUDT14O95848 222 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 RENP00797 406 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 IGKV3-11P04433 115 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 KRT8P05787 483 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 CD14P08571 375 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 PRKAR1AP10644 381 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 GP1BBP13224 206 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 MYF5P13349 255 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 CXCR1P25024 350 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 APEX1P27695 318 aaKnown RBP9.52□□□□□ -0.89
CPNE1-218ENST00000439806 ITPKBP27987 946 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 TACR3P29371 465 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 TALDO1P37837 337 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 AQP2P41181 271 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 RFX2P48378 723 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 EVX1P49640 407 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 HCCSP53701 268 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 SELENBP1Q13228 472 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 CDK5R1Q15078 307 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 EBPQ15125 230 aaKnown RBP9.52□□□□□ -0.89
CPNE1-218ENST00000439806 QPRTQ15274 297 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 NSDHLQ15738 373 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 CDONQ4KMG0 1287 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 ACSM3Q53FZ2 586 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 ALG10Q5BKT4 473 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 VWA2Q5GFL6 755 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 RSBN1Q5VWQ0 802 aaPredicted RBP9.52□□□□□ -0.89
CPNE1-218ENST00000439806 RPL22L1Q6P5R6 122 aaKnown RBP9.52□□□□□ -0.89
CPNE1-218ENST00000439806 RPTNQ6XPR3 784 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 UBQLNLQ8IYU4 475 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 NPEPL1Q8NDH3 523 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 NLGN4YQ8NFZ3 816 aaPredicted RBP9.52□□□□□ -0.89
CPNE1-218ENST00000439806 LIPHQ8WWY8 451 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 THAP4Q8WY91 577 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 CCDC74AQ96AQ1 378 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 OMA1Q96E52 524 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 Q96M85 177 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 TTYH2Q9BSA4 534 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 TBL1XR1Q9BZK7 514 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 NRSN2Q9GZP1 204 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 SEMA5BQ9P283 1151 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 NCDNQ9UBB6 729 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 EXTL2Q9UBQ6 330 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 TEKT2Q9UIF3 430 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 GNG8Q9UK08 70 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 SRPK3Q9UPE1 567 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 HIF3AQ9Y2N7 669 aa9.52□□□□□ -0.89
CPNE1-218ENST00000439806 MKI67P46013 3256 aaKnown RBP9.51□□□□□ -0.89
CPNE1-218ENST00000439806 CDC14CA4D256 554 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 OR6C68A6NDL8 312 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 TO15178 435 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 HCRTR2O43614 444 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 NDUFB5O43674 189 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 GMFGO60234 142 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 TSPAN2O60636 221 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 SLC25A12O75746 678 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 CCNKO75909 580 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 ARL6IP5O75915 188 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 APEHP13798 732 aaKnown RBP9.51□□□□□ -0.89
CPNE1-218ENST00000439806 PGCP20142 388 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 RAB3BP20337 219 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 MAP2K3P46734 347 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 RPS5P46782 204 aaKnown RBP9.51□□□□□ -0.89
CPNE1-218ENST00000439806 ARRB1P49407 418 aaPredicted RBP9.51□□□□□ -0.89
CPNE1-218ENST00000439806 SLC25A1P53007 311 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 PNLIPRP2P54317 469 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 ZNF117Q03924 483 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 RIN1Q13671 783 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 SFXN4Q6P4A7 337 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 WDR74Q6RFH5 385 aaPredicted RBP9.51□□□□□ -0.89
CPNE1-218ENST00000439806 CBLN3Q6UW01 205 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 APOOLQ6UXV4 268 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 FAM220AQ7Z4H9 259 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 LRRC28Q86X40 367 aaPredicted RBP9.51□□□□□ -0.89
CPNE1-218ENST00000439806 C9orf40Q8IXQ3 194 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 Q8N402 240 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 SLC25A45Q8N413 288 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 RFLNBQ8N5W9 214 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 TEX19Q8NA77 164 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 LRRC75AQ8NAA5 344 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 C17orf47Q8NEP4 570 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 ZPLD1Q8TCW7 415 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 GHSRQ92847 366 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 TP53INP1Q96A56 240 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 CLDN23Q96B33 292 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms