RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CHRNB3Q05901 458 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 MYBPHQ13203 477 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 FAM98BQ52LJ0 330 aaKnown RBP15.78■□□□□ 0.12
CCDC188-201ENST00000439765 WBP2NLQ6ICG8 309 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 RNF128Q8TEB7 428 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 GEMIN6Q8WXD5 167 aaKnown RBP15.78■□□□□ 0.12
CCDC188-201ENST00000439765 SLC35B4Q969S0 331 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 SLCO4A1Q96BD0 722 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 ARL5BQ96KC2 179 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 WFDC6Q9BQY6 131 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 AURKCQ9UQB9 309 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 AKAP9Q99996 3911 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 ZC3H12DA2A288 527 aaKnown RBP15.78■□□□□ 0.12
CCDC188-201ENST00000439765 CRHP06850 196 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 RAP2AP10114 183 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 HOXB6P17509 224 aaKnown RBP15.78■□□□□ 0.12
CCDC188-201ENST00000439765 ENPP1P22413 925 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 HTR2AP28223 471 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 OR1E2P47887 323 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 GUSBP1Q15486 140 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 FCRLAQ7L513 359 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 BTLAQ7Z6A9 289 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 CDH24Q86UP0 819 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 CARM1Q86X55 608 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 PAPD5Q8NDF8 572 aaKnown RBP15.78■□□□□ 0.12
CCDC188-201ENST00000439765 OR4D11Q8NGI4 311 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 STARD4Q96DR4 205 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 GMPPAQ96IJ6 420 aaPredicted RBP15.78■□□□□ 0.12
CCDC188-201ENST00000439765 C7orf34Q96L11 122 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 ADAM19Q9H013 955 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 SLC9A8Q9Y2E8 581 aa15.78■□□□□ 0.12
CCDC188-201ENST00000439765 MTORP42345 2549 aa15.77■□□□□ 0.12
CCDC188-201ENST00000439765 M0R3H8 397 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 SULT2B1O00204 365 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 SMAD9O15198 467 aaKnown RBP15.77■□□□□ 0.11
CCDC188-201ENST00000439765 CXCR1P25024 350 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 CTBP2P56545 445 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 RAC3P60763 192 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 FBXL19-AS1Q494R0 122 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 TMPPEQ6ZT21 453 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 FAM214BQ7L5A3 538 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 RBM45Q8IUH3 476 aaKnown RBP15.77■□□□□ 0.11
CCDC188-201ENST00000439765 OR6T1Q8NGN1 323 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 VANGL1Q8TAA9 524 aaPredicted RBP15.77■□□□□ 0.11
CCDC188-201ENST00000439765 PYDC1Q8WXC3 89 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 RNASE6Q93091 150 aaKnown RBP15.77■□□□□ 0.11
CCDC188-201ENST00000439765 C3orf49Q96BT1 292 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 DDIT4LQ96D03 193 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 LRRC46Q96FV0 321 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 ZNF559Q9BR84 538 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 PRR14Q9BWN1 585 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 AMBRA1Q9C0C7 1298 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 OPN3Q9H1Y3 402 aaPredicted RBP15.77■□□□□ 0.11
CCDC188-201ENST00000439765 PIGMQ9H3S5 423 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 IL1RAPQ9NPH3 570 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 GALNT8Q9NY28 637 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 JKAMPQ9P055 326 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 EMC9Q9Y3B6 208 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 AP4S1Q9Y587 144 aa15.77■□□□□ 0.11
CCDC188-201ENST00000439765 PRRC2AP48634 2157 aaKnown RBP15.76■□□□□ 0.11
CCDC188-201ENST00000439765 ZNF208O43345 1280 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 SS18L1O75177 396 aaPredicted RBP15.76■□□□□ 0.11
CCDC188-201ENST00000439765 FKBP6O75344 327 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 AGTR1P30556 359 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 MAGEA2P43356 314 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 CSNK2A1P68400 391 aaPredicted RBP15.76■□□□□ 0.11
CCDC188-201ENST00000439765 VLDLRP98155 873 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 IQCCQ4KMZ1 466 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 ZFP1Q6P2D0 407 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 PIWIL3Q7Z3Z3 882 aaKnown RBP15.76■□□□□ 0.11
CCDC188-201ENST00000439765 STMN2Q93045 179 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 CHID1Q9BWS9 393 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 RBM24Q9BX46 236 aaKnown RBP15.76■□□□□ 0.11
CCDC188-201ENST00000439765 S100A14Q9HCY8 104 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 ARMC1Q9NVT9 282 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 RPS6KB2Q9UBS0 482 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 TESQ9UGI8 421 aaKnown RBP15.76■□□□□ 0.11
CCDC188-201ENST00000439765 HDGFL3Q9Y3E1 203 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 ITPR3Q14573 2671 aa15.76■□□□□ 0.11
CCDC188-201ENST00000439765 IFNW1P05000 195 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 FABP3P05413 133 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 RNPS1Q15287 305 aaKnown RBP15.75■□□□□ 0.11
CCDC188-201ENST00000439765 TESK1Q15569 626 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 NPTX1Q15818 432 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 EEF1A1P5Q5VTE0 462 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 TSEN54Q7Z6J9 526 aaKnown RBP15.75■□□□□ 0.11
CCDC188-201ENST00000439765 ZDHHC21Q8IVQ6 265 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 C12orf49Q9H741 205 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 YY1AP1Q9H869 796 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 KLHL13Q9P2N7 655 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 FREM1Q5H8C1 2179 aa15.75■□□□□ 0.11
CCDC188-201ENST00000439765 HRNRQ86YZ3 2850 aaPredicted RBP15.74■□□□□ 0.11
CCDC188-201ENST00000439765 A0A1B0GWA3 101 aa15.74■□□□□ 0.11
CCDC188-201ENST00000439765 MSTNO14793 375 aa15.74■□□□□ 0.11
CCDC188-201ENST00000439765 TPST2O60704 377 aa15.74■□□□□ 0.11
CCDC188-201ENST00000439765 PMS2P2O95744 297 aa15.74■□□□□ 0.11
CCDC188-201ENST00000439765 PEX19P40855 299 aa15.74■□□□□ 0.11
CCDC188-201ENST00000439765 OR2B6P58173 313 aa15.74■□□□□ 0.11
CCDC188-201ENST00000439765 ATG4DQ86TL0 474 aaPredicted RBP15.74■□□□□ 0.11
CCDC188-201ENST00000439765 RANBP3LQ86VV4 465 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms