RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 VMACQ2NL98 169 aa21.25■□□□□ 0.99
CPNE1-217ENST00000439669 C6orf89Q6UWU4 347 aa21.25■□□□□ 0.99
CPNE1-217ENST00000439669 PATL1Q86TB9 770 aaKnown RBP21.25■□□□□ 0.99
CPNE1-217ENST00000439669 SLC26A7Q8TE54 656 aa21.25■□□□□ 0.99
CPNE1-217ENST00000439669 SLC25A36Q96CQ1 311 aa21.25■□□□□ 0.99
CPNE1-217ENST00000439669 HS3ST6Q96QI5 342 aa21.25■□□□□ 0.99
CPNE1-217ENST00000439669 EVA1AQ9H8M9 152 aa21.25■□□□□ 0.99
CPNE1-217ENST00000439669 C12orf10Q9HB07 376 aa21.25■□□□□ 0.99
CPNE1-217ENST00000439669 GID8Q9NWU2 228 aa21.25■□□□□ 0.99
CPNE1-217ENST00000439669 M0R3H8 397 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 PNMTP11086 282 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 IGHV1-2P23083 117 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 RPS5P46782 204 aaKnown RBP21.24■□□□□ 0.99
CPNE1-217ENST00000439669 GZMMP51124 257 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 TESK1Q15569 626 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 FBXW9Q5XUX1 488 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 ULK3Q6PHR2 472 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 GPAT4Q86UL3 456 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 POU5F2Q8N7G0 328 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 OR9K2Q8NGE7 335 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 WFDC6Q9BQY6 131 aa21.24■□□□□ 0.99
CPNE1-217ENST00000439669 KLF4O43474 513 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 CCDC22O60826 627 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 ATE1O95260 518 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 COX5AP20674 150 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 NTF4P34130 210 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 EGR4Q05215 589 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 OR1Q1Q15612 314 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 TAB1Q15750 504 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 STK11Q15831 433 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 DUSP7Q16829 419 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 TMEM225Q6GV28 225 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 GPR32P1Q8NGA4 272 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 MFSD8Q8NHS3 518 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 RCN3Q96D15 328 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 KTI12Q96EK9 354 aaPredicted RBP21.23■□□□□ 0.99
CPNE1-217ENST00000439669 SLC47A1Q96FL8 570 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 PLPPR2Q96GM1 343 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 ARHGDIGQ99819 225 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 USB1Q9BQ65 265 aaKnown RBP21.23■□□□□ 0.99
CPNE1-217ENST00000439669 SF3B5Q9BWJ5 86 aaKnown RBP21.23■□□□□ 0.99
CPNE1-217ENST00000439669 FAM107BQ9H098 131 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 UBTD1Q9HAC8 227 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 PARPBPQ9NWS1 579 aa21.23■□□□□ 0.99
CPNE1-217ENST00000439669 LGI1O95970 557 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 LOXP28300 417 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-217ENST00000439669 NR1H2P55055 460 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 FAM91A1Q658Y4 838 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 C5orf46Q6UWT4 87 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 SPATA21Q7Z572 469 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 CALHM3Q86XJ0 350 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 P3H2Q8IVL5 708 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 VANGL1Q8TAA9 524 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-217ENST00000439669 HSD17B8Q92506 261 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 SLC38A4Q969I6 547 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 TAMM41Q96BW9 452 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 MCHR1Q99705 422 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 ELAC2Q9BQ52 826 aaKnown RBP21.22■□□□□ 0.99
CPNE1-217ENST00000439669 PTDSS2Q9BVG9 487 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 ASB6Q9NWX5 421 aa21.22■□□□□ 0.99
CPNE1-217ENST00000439669 A0A0B4J2E0 115 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 A0A1B0GX12 115 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 TPST2O60704 377 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 C8BP07358 591 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 GGT1P19440 569 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 SEC24CP53992 1094 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 FAPQ12884 760 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 NRF1Q16656 503 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 RP9Q8TA86 221 aaKnown RBP21.21■□□□□ 0.99
CPNE1-217ENST00000439669 FOXC2Q99958 501 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 NGBQ9NPG2 151 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 UPB1Q9UBR1 384 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 MALT1Q9UDY8 824 aa21.21■□□□□ 0.99
CPNE1-217ENST00000439669 IGKV1D-42A0A075B6H8 117 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 CIB4A0PJX0 185 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 CCT8L1PA6NM43 557 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 FTCDNL1E5RQL4 147 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 RAD51DO75771 328 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 VAMP5O95183 116 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 CD247P20963 164 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 PTNP21246 168 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 P2RY4P51582 365 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 FAM69AQ5T7M9 428 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 ERICH5Q6P6B1 374 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 CCDC80Q76M96 950 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 AAED1Q7RTV5 226 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 ZNF433Q8N7K0 673 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-217ENST00000439669 OR6T1Q8NGN1 323 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 TMEM45BQ96B21 275 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 ZNF385AQ96PM9 386 aaKnown RBP21.2■□□□□ 0.98
CPNE1-217ENST00000439669 NSRP1Q9H0G5 558 aaKnown RBP21.2■□□□□ 0.98
CPNE1-217ENST00000439669 USP22Q9UPT9 525 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 RASD1Q9Y272 281 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 OTOGQ6ZRI0 2925 aa21.2■□□□□ 0.98
CPNE1-217ENST00000439669 TRAV36DV7A0A075B6V5 113 aa21.19■□□□□ 0.98
CPNE1-217ENST00000439669 A0A087WUJ7 227 aa21.19■□□□□ 0.98
CPNE1-217ENST00000439669 OR2T1O43869 369 aa21.19■□□□□ 0.98
CPNE1-217ENST00000439669 FMO6PO60774 539 aa21.19■□□□□ 0.98
CPNE1-217ENST00000439669 COX4I1P13073 169 aa21.19■□□□□ 0.98
CPNE1-217ENST00000439669 CDH12P55289 794 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms