RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CNIH4Q9P003 139 aa5.94□□□□□ -1.46
BDNF-211ENST00000439476 WNT6Q9Y6F9 365 aa5.94□□□□□ -1.46
BDNF-211ENST00000439476 ZNFX1Q9P2E3 1918 aaKnown RBP5.94□□□□□ -1.46
BDNF-211ENST00000439476 A0A1B0GVT2 93 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 F5H5P2 479 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 LCMT2O60294 686 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 PRF1P14222 555 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 MMP12P39900 470 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 SOX2P48431 317 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 DAP3P51398 398 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 ILKQ13418 452 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 GK2Q14410 553 aaPredicted RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 ZBTB37Q5TC79 503 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 SFRP4Q6FHJ7 346 aaPredicted RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 PODNL1Q6PEZ8 512 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ZNF765Q7L2R6 523 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 BHLHA9Q7RTU4 235 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 FOXRED2Q8IWF2 684 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 LAS2Q8IYD9 372 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 TCEAL8Q8IYN2 117 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ASB17Q8WXJ9 295 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 SMARCD2Q92925 531 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 PTCHD1Q96NR3 888 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 C1QTNF2Q9BXJ5 285 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 STRADBQ9C0K7 418 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 SAP130Q9H0E3 1048 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 DMRT3Q9NQL9 472 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 PPP4R1LQ9P1A2 415 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 FER1L6Q2WGJ9 1857 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 A0A0A6YYJ9 748 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 M0R082 166 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 EIF3GO75821 320 aaKnown RBP eCLIP5.93□□□□□ -1.46
BDNF-211ENST00000439476 AKAIN1P0CW23 69 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 SMIM6P0DI80 62 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ACPPP15309 386 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ARSBP15848 533 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 RBMS1P29558 406 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 ARF3P61204 181 aaPredicted RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 RPS25P62851 125 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 ARF1P84077 181 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 IFITM3Q01628 133 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 HYAL4Q2M3T9 481 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 PLK5Q496M5 336 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 C2orf27AQ580R0 203 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 Q5BKY6 102 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 HENMT1Q5T8I9 393 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 LIMS2Q7Z4I7 341 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 BCDIN3DQ7Z5W3 292 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 CALHM3Q86XJ0 350 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 KLHDC8AQ8IYD2 350 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ZFP82Q8N141 532 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 C12orf45Q8N5I9 185 aaPredicted RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 NKAIN3Q8N8D7 197 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 CHST14Q8NCH0 376 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 OR51A7Q8NH64 312 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 HMGB4Q8WW32 186 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 NANOS1Q8WY41 292 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 RBPMSQ93062 196 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 DDIT4LQ96D03 193 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 C10orf90Q96M02 699 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 COQ10AQ96MF6 247 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 MYADMQ96S97 322 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 CDCA4Q9BXL8 241 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 DEFB126Q9BYW3 111 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 MRPL15Q9P015 296 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 DMRT1Q9Y5R6 373 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 TMEM210A6NLX4 147 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 H0YIV9 168 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 SMLR1H3BR10 107 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 NCR1O76036 304 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 SLC22A5O76082 557 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 KLKB1P03952 638 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ZNF35P13682 527 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 FBLP22087 321 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 SGSHP51688 502 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 DCAF7P61962 342 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 GAB1Q13480 694 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ASAH1Q13510 395 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 RAB31Q13636 194 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 HMGN3Q15651 99 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 PLXDC1Q8IUK5 500 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 CPOQ8IVL8 374 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 OR13C3Q8NGS6 347 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 PPP1R35Q8TAP8 253 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 IFI44Q8TCB0 444 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 SMAP2Q8WU79 429 aaPredicted RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 SPRYD4Q8WW59 207 aaPredicted RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 MMABQ96EY8 250 aaPredicted RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 CLUHP3Q96NS8 147 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 TREX2Q9BQ50 279 aaPredicted RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 CLSTN3Q9BQT9 956 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ALG8Q9BVK2 526 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ANKRD19PQ9H560 264 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 PDFQ9HBH1 243 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 PISDQ9UG56 409 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 CA14Q9ULX7 337 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 NDRG2Q9UN36 371 aaKnown RBP5.93□□□□□ -1.46
BDNF-211ENST00000439476 CSNK1G3Q9Y6M4 447 aa5.93□□□□□ -1.46
BDNF-211ENST00000439476 ZNF831Q5JPB2 1677 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms