RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 FAM69AQ5T7M9 428 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 ALKBH2Q6NS38 261 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 C6orf89Q6UWU4 347 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 CASP12Q6UXS9 341 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 CCDC80Q76M96 950 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 AAED1Q7RTV5 226 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 SPATA21Q7Z572 469 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 ABHD12BQ7Z5M8 362 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-216ENST00000439475 GPAT4Q86UL3 456 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 PROX1Q92786 737 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 S100PBPQ96BU1 408 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 HOPXQ9BPY8 73 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-216ENST00000439475 ESRP2Q9H6T0 727 aaKnown RBP9.27□□□□□ -0.93
MCF2L-216ENST00000439475 PLEKHF2Q9H8W4 249 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 CCM2LQ9NUG4 571 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-216ENST00000439475 ARMCX1Q9P291 453 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 BAG5Q9UL15 447 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 FLVCR1Q9Y5Y0 555 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 TRAV36DV7A0A075B6V5 113 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.26□□□□□ -0.93
MCF2L-216ENST00000439475 DEFB108AA8MXU0 73 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 AIM2O14862 343 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 AKAP8O43823 692 aaKnown RBP9.26□□□□□ -0.93
MCF2L-216ENST00000439475 NPIPB7O75200 414 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 KRT33AO76009 404 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 OPN1SWP03999 348 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 COX4I1P13073 169 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF43P17038 809 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 GGT1P19440 569 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 GZMMP51124 257 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 FAPQ12884 760 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 STK11Q15831 433 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 RABL3Q5HYI8 236 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 TIMM23BQ5SRD1 257 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 OR7E24Q6IFN5 339 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF613Q6PF04 617 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 TTC33Q6PID6 262 aaPredicted RBP9.26□□□□□ -0.93
MCF2L-216ENST00000439475 PAMR1Q6UXH9 720 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 CALHM3Q86XJ0 350 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 LURAP1LQ8IV03 231 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 POMGNT2Q8NAT1 580 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 OR9K2Q8NGE7 335 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 OR6S1Q8NH40 331 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 NRGNQ92686 78 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 PIGTQ969N2 578 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 TMEM45BQ96B21 275 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 RCN3Q96D15 328 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 CMTM5Q96DZ9 223 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 PLPPR2Q96GM1 343 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 ARHGDIGQ99819 225 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 FOXC2Q99958 501 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 FAM107BQ9H098 131 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 TAS2R16Q9NYV7 291 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 B3GALT5Q9Y2C3 310 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 PLEKHA6Q9Y2H5 1048 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 CORINQ9Y5Q5 1042 aa9.26□□□□□ -0.93
MCF2L-216ENST00000439475 A0A0B4J2E0 115 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 A0A1B0GX12 115 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 ELOVL7A1L3X0 281 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 FAM220BPB1ANY3 271 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 M0R3H8 397 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 KLF4O43474 513 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 CHP2O43745 196 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 RAMP1O60894 148 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 LYZL6O75951 148 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 IGHV3-9P01782 118 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 THBDP07204 575 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 NQO1P15559 274 aaKnown RBP9.25□□□□□ -0.93
MCF2L-216ENST00000439475 COX5AP20674 150 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 CD247P20963 164 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 IGHV1-2P23083 117 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 PAX7P23759 505 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 HTR2AP28223 471 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 HOXC12P31275 282 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 LSP1P33241 339 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 SEC24CP53992 1094 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 CDH12P55289 794 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 GNGT1P63211 74 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 IL1RL1Q01638 556 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 EGR4Q05215 589 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 C1DQ13901 141 aaKnown RBP9.25□□□□□ -0.93
MCF2L-216ENST00000439475 TSC22D1Q15714 1073 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 TAB1Q15750 504 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 ACKR1Q16570 336 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 NRF1Q16656 503 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 ENTPD8Q5MY95 495 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 C1QTNF12Q5T7M4 302 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 C20orf204Q6ZNR8 217 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 CREB3L2Q70SY1 520 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 H1FNTQ75WM6 255 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-216ENST00000439475 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.25□□□□□ -0.93
MCF2L-216ENST00000439475 C10orf53Q8N6V4 93 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 POU5F2Q8N7G0 328 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF433Q8N7K0 673 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-216ENST00000439475 OR2T12Q8NG77 320 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 OR6T1Q8NGN1 323 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 VANGL1Q8TAA9 524 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-216ENST00000439475 LZICQ8WZA0 190 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 MBD6Q96DN6 1003 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms