RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 FCAMRQ8WWV6 532 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 HIST1H2ACQ93077 130 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 WNT2BQ93097 391 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 ARRDC3Q96B67 414 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 BPIFA2Q96DR5 249 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 RSPRY1Q96DX4 576 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 TSPAN10Q9H1Z9 355 aaPredicted RBP12.47□□□□□ -0.41
PCNX3-202ENST00000439247 TAS2R10Q9NYW0 307 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 KLHL9Q9P2J3 617 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 OPN4Q9UHM6 478 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 CES1P1Q9UKY3 287 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 TUBAL3A6NHL2 446 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 FAM171A2A8MVW0 826 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SDC3O75056 442 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 DNAJB6O75190 326 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 OR2A4O95047 310 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SRMP19623 302 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 CDK2P24941 298 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 NDUFS1P28331 727 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 VIPR2P41587 438 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 EPHA4P54764 986 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 RAP2BP61225 183 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 DLX2Q07687 328 aaPredicted RBP12.46□□□□□ -0.41
PCNX3-202ENST00000439247 OR1Q1Q15612 314 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 DUSP5Q16690 384 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 YOD1Q5VVQ6 348 aaPredicted RBP12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SFTPA1Q8IWL2 248 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SPICQ8N5J4 248 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 MRPL38Q96DV4 380 aaKnown RBP12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SMIM19Q96E16 107 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 LRRC46Q96FV0 321 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 OR2A7Q96R45 310 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SLC38A3Q99624 504 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 PRDM9Q9NQV7 894 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SPHK2Q9NRA0 654 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 C2orf42Q9NWW7 574 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 KCNE5Q9UJ90 142 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SIGLEC7Q9Y286 467 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 TSPAN11A1L157 253 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SELENOFO60613 162 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 PRAF2O60831 178 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 STX11O75558 287 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 DPP4P27487 766 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 ANXA11P50995 505 aaKnown RBP12.46□□□□□ -0.41
PCNX3-202ENST00000439247 GK2Q14410 553 aaPredicted RBP12.46□□□□□ -0.41
PCNX3-202ENST00000439247 TMEM69Q5SWH9 247 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 GJD3Q8N144 294 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 CHST6Q9GZX3 395 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 CAPN10Q9HC96 672 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 TAS2R5Q9NYW4 299 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 SPEGQ15772 3267 aa12.46□□□□□ -0.41
PCNX3-202ENST00000439247 OR2W5A6NFC9 320 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 RIIAD1A6NNX1 92 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 C4orf47A7E2U8 309 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 D6RAR5 112 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 GABARAPH6UMI1 98 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 LINC01387J3KSC0 135 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 CTDSPLO15194 276 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 SIRPAP78324 504 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 MAT1AQ00266 395 aaKnown RBP12.46□□□□□ -0.42
PCNX3-202ENST00000439247 SORDQ00796 357 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 TRAM1Q15629 374 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 ELP2Q6IA86 826 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 MRM1Q6IN84 353 aaKnown RBP12.46□□□□□ -0.42
PCNX3-202ENST00000439247 SLC48A1Q6P1K1 146 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 ASPGQ86U10 573 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 PDZD9Q8IXQ8 264 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 OR6V1Q8N148 313 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 OR4C6Q8NH72 309 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 FERD3LQ96RJ6 166 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 ACTRT3Q9BYD9 372 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 NRIP3Q9NQ35 241 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 HPF1Q9NWY4 346 aa12.46□□□□□ -0.42
PCNX3-202ENST00000439247 ANKRD20A5PA0PJZ0 165 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 OR6C65A6NJZ3 312 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 IFITM5A6NNB3 132 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 MPIP34949 423 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 TAS2R43P59537 309 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 CBFBQ13951 182 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 KCNAB1Q14722 419 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 MRPL2Q5T653 305 aaKnown RBP12.45□□□□□ -0.42
PCNX3-202ENST00000439247 ABHD17CQ6PCB6 329 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 TMEM88Q6PEY1 159 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 OR2A1Q8NGT9 310 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 SFXN5Q8TD22 340 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 SNX33Q8WV41 574 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 ATOH1Q92858 354 aaPredicted RBP12.45□□□□□ -0.42
PCNX3-202ENST00000439247 NARS2Q96I59 477 aaKnown RBP12.45□□□□□ -0.42
PCNX3-202ENST00000439247 IL21RQ9HBE5 538 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 TMEM74BQ9NUR3 256 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 OR5V1Q9UGF6 321 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF230Q9UIE0 474 aaPredicted RBP12.45□□□□□ -0.42
PCNX3-202ENST00000439247 FOXJ3Q9UPW0 622 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 PCCBP05166 539 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 AKR1C2P52895 323 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 PPP2CBP62714 309 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 PPP2CAP67775 309 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 AKR1C1Q04828 323 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms