RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 OR1D4P47884 311 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 ALG10BQ5I7T1 473 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 TOR2AQ5JU69 321 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 TMPRSS11FQ6ZWK6 438 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 TMPRSS9Q7Z410 1059 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 OAFQ86UD1 273 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 OR8H1Q8NGG4 311 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 AP3S1Q92572 193 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 ZNF559Q9BR84 538 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 TTTY10Q9BZA0 68 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 CMC2Q9NRP2 79 aa12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 DNAJB12Q9NXW2 375 aaKnown RBP12.73□□□□□ -0.37
PTCHD3-201ENST00000438700 DAPL1A0PJW8 107 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 CIB4A0PJX0 185 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 CHP2O43745 196 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 IFI6P09912 130 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 RRAS2P62070 204 aaPredicted RBP12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 IGLV3-21P80748 117 aaPredicted RBP12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 CRYZQ08257 329 aaKnown RBP12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 CRMP1Q14194 572 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 FAM205BPQ63HN1 556 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 ZNF613Q6PF04 617 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 NPSR1Q6W5P4 371 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 BPHLQ86WA6 291 aaPredicted RBP12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 SPERTQ8NA61 448 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 DGAT2Q96PD7 388 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 TNFRSF13CQ96RJ3 184 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 TIMP4Q99727 224 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 PRELID1Q9Y255 219 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 DMDP11532 3685 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 M0R296 226 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 FABP7O15540 132 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 ZNF749O43361 778 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 LANCL1O43813 399 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 ACAA2P42765 397 aaKnown RBP12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 ESCO2Q56NI9 601 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 PEAR1Q5VY43 1037 aaPredicted RBP12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 TMEM91Q6ZNR0 172 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 GPR135Q8IZ08 494 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 GALNT6Q8NCL4 622 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 RCBTB1Q8NDN9 531 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 DNAJA4Q8WW22 397 aaPredicted RBP12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 VSTM2LQ96N03 204 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 FN3KQ9H479 309 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 C14orf105Q9NVL8 296 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 ING3Q9NXR8 418 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 TMEM5Q9Y2B1 443 aa12.72□□□□□ -0.37
PTCHD3-201ENST00000438700 MPDZO75970 2070 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 RIIAD1A6NNX1 92 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 LRRN3E7EW58 273 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 UBL4AP11441 157 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ZNF250P15622 560 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 CLDN20P56880 219 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 HSD17B7P56937 341 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ASB18Q6ZVZ8 466 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 KMT5CQ86Y97 462 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 EID2Q8N6I1 236 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 DTWD2Q8NBA8 298 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 DUSP18Q8NEJ0 188 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ZC3H10Q96K80 434 aaKnown RBP12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 TEAD3Q99594 435 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ARPC5LQ9BPX5 153 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 LRRN3Q9H3W5 708 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ZNF768Q9H5H4 540 aaKnown RBP12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 NIPAL2Q9H841 368 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ERVK-19Q9WJR5 959 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 FRYLO94915 3013 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 E9PI62 339 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 RNF13O43567 381 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 HCN1O60741 890 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 PAHP00439 452 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 SYPP08247 313 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 PNLIPP16233 465 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ACSM1Q08AH1 577 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 CDONQ4KMG0 1287 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 FAM27D1Q5T7N8 215 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ZNF57Q68EA5 555 aaPredicted RBP12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 TIGD3Q6B0B8 471 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 RPL13AP3Q6NVV1 102 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ARL9Q6T311 187 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 KIRREL2Q6UWL6 708 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 ZNF574Q6ZN55 896 aaPredicted RBP12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 CREB3L2Q70SY1 520 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 GHDCQ8N2G8 530 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 C9orf62Q8N4C0 152 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 OMA1Q96E52 524 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 NDC1Q9BTX1 674 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 LMF2Q9BU23 707 aaKnown RBP12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 POLE3Q9NRF9 147 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 FGF21Q9NSA1 209 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 BABAM2Q9NXR7 383 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 KCNN3Q9UGI6 736 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 OR10H1Q9Y4A9 318 aa12.71□□□□□ -0.37
PTCHD3-201ENST00000438700 FER1L5A0AVI2 2057 aa12.71□□□□□ -0.38
PTCHD3-201ENST00000438700 INMT-MINDY4F8WBC2 141 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 CDK2AP1O14519 115 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 IFNA16P05015 189 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 ZNF3P17036 446 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms