RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 LIN52Q52LA3 116 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 OTUD3Q5T2D3 398 aaPredicted RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 C6orf52Q5T4I8 152 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 MRPL2Q5T653 305 aaKnown RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 HHATQ5VTY9 493 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 PAQR6Q6TCH4 344 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 ZNF621Q6ZSS3 439 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 AAED1Q7RTV5 226 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 SLC46A3Q7Z3Q1 461 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 GPAT4Q86UL3 456 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 LRRC34Q8IZ02 419 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 CADM2Q8N3J6 435 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 ZNF525Q8N782 197 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 OR52E4Q8NGH9 312 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 CNOT9Q92600 299 aaKnown RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 HTRA1Q92743 480 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 ZNF524Q96C55 264 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 CCDC115Q96NT0 180 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 OR52E6Q96RD3 313 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 TNFRSF13CQ96RJ3 184 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 PAIP2Q9BPZ3 127 aaKnown RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 SAP130Q9H0E3 1048 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 SHARPINQ9H0F6 387 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 MANSC1Q9H8J5 431 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 MTHFD2LQ9H903 347 aaPredicted RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 MOV10Q9HCE1 1003 aaKnown RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 KCNK9Q9NPC2 374 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 SLC17A5Q9NRA2 495 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 ADPRHL2Q9NX46 363 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 CALML5Q9NZT1 146 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 P2RX2Q9UBL9 471 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 OSGIN1Q9UJX0 560 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 FLVCR1Q9Y5Y0 555 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 RTTNQ86VV8 2226 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS50-203ENST00000436177 FBN1P35555 2871 aaKnown RBP6.8□□□□□ -1.32
VPS50-203ENST00000436177 A6NJY4 79 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 OR6C65A6NJZ3 312 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 TRPC5OSA6NMA1 111 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 VSTM5A8MXK1 200 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
VPS50-203ENST00000436177 TMEM229AB2RXF0 380 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 ATP6V1G2-DDX39BF2Z307 99 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 HMGN4O00479 90 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 FAAHO00519 579 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 RFXANKO14593 260 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 AP3D1O14617 1153 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 ITM2AO43736 263 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 BCAS1O75363 584 aaPredicted RBP6.8□□□□□ -1.32
VPS50-203ENST00000436177 AHSA1O95433 338 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 CRYAAP02489 173 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 FAM157BP0CG42 384 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 BGNP21810 368 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 APOBEC3AP31941 199 aaPredicted RBP6.8□□□□□ -1.32
VPS50-203ENST00000436177 ETV4P43268 484 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 GZMKP49863 264 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 PDLIM4P50479 330 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 PHC1P78364 1004 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 VLDLRP98155 873 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 LOXL1Q08397 574 aaPredicted RBP6.8□□□□□ -1.32
VPS50-203ENST00000436177 FUT5Q11128 374 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 GGTLC2Q14390 218 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 CASP8Q14790 479 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 OR7A5Q15622 319 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 GABRA6Q16445 453 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 GSTA3Q16772 222 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 ZSWIM7Q19AV6 140 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 PRAMEF8Q5VWM4 474 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 PRAMEF7Q5VXH5 474 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 CYB5R2Q6BCY4 276 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 NXNQ6DKJ4 435 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 TMEM225Q6GV28 225 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 B3GLCTQ6Y288 498 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 LRRC74BQ6ZQY2 392 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 DNM1P46Q6ZS02 220 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 SPATA19Q7Z5L4 167 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 CROCCP2Q86T23 111 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 ADGRG3Q86Y34 549 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 ANKFN1Q8N957 763 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 PLPP7Q8NBV4 271 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 OR9K2Q8NGE7 335 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 PNPT1Q8TCS8 783 aaKnown RBP6.8□□□□□ -1.32
VPS50-203ENST00000436177 AENQ8WTP8 325 aaKnown RBP6.8□□□□□ -1.32
VPS50-203ENST00000436177 FBXO17Q96EF6 278 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 MUS81Q96NY9 551 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 PIMREGQ9BSJ6 248 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 TMEM109Q9BVC6 243 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 SF3B5Q9BWJ5 86 aaKnown RBP6.8□□□□□ -1.32
VPS50-203ENST00000436177 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 SLC38A1Q9H2H9 487 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 PCNX3Q9H6A9 2034 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 OBP2BQ9NPH6 170 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 SLC7A10Q9NS82 523 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 TMEM45AQ9NWC5 275 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 BTNL2Q9UIR0 455 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 KCNS2Q9ULS6 477 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 ZNF232Q9UNY5 417 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 MOKQ9UQ07 419 aa6.8□□□□□ -1.32
VPS50-203ENST00000436177 A0A096LPI6 279 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 TMEM72A0PK05 275 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms