RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 ABCE1P61221 599 aaKnown RBP9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 VSNL1P62760 191 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 EFNB3Q15768 340 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 CHI3L2Q15782 390 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 GSTA3Q16772 222 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 C3orf36Q3SXR2 165 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 HIKESHIQ53FT3 197 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 OTUD3Q5T2D3 398 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 NUDCD3Q8IVD9 361 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 ARIH2OSQ8N7S6 290 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 WDR60Q8WVS4 1066 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 MSI2Q96DH6 328 aaKnown RBP9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 SLC38A2Q96QD8 506 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 NAA11Q9BSU3 229 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 SHARPINQ9H0F6 387 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 MEAF6Q9HAF1 191 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 MYOZ1Q9NP98 299 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 CA10Q9NS85 328 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 MOKQ9UQ07 419 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 CHST2Q9Y4C5 530 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 FKBP7Q9Y680 259 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 PMF1-BGLAPU3KQ54 211 aa9.54□□□□□ -0.88
SPTLC1P4-201ENST00000435997 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 CCDC154A6NI56 674 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 FRS3O43559 492 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 AKR7A3O95154 331 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 WNT11O96014 354 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 IGKV3-15P01624 115 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 PGRP06401 933 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 UQCRBP14927 111 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 SRD5A1P18405 259 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 LBPP18428 481 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 PAX7P23759 505 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 S100A3P33764 101 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 PDLIM4P50479 330 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 RPL14P50914 215 aaKnown RBP9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 SNRPD2P62316 118 aaKnown RBP9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 IFFO1Q0D2I5 559 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 CEACAM7Q14002 265 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 OR7A5Q15622 319 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 ADIPOQQ15848 244 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 TBRG1Q3YBR2 411 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 COX20Q5RI15 118 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 RNF220Q5VTB9 566 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 FAM166AQ6J272 317 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 KLHL24Q6TFL4 600 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 ZNF836Q6ZNA1 936 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 LINGO2Q7L985 606 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 ABHD12BQ7Z5M8 362 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 ZNF440Q8IYI8 595 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 KIRREL3Q8IZU9 778 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 TRIML2Q8N7C3 387 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 TMEM99Q8N816 258 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 FAM169BQ8N8A8 192 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 OR1K1Q8NGR3 316 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 MAGEE2Q8TD90 523 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 ALKBH3Q96Q83 286 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 PIMREGQ9BSJ6 248 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 C19orf24Q9BVV8 132 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 NUF2Q9BZD4 464 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 BPESC1Q9GZL8 116 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 PLK3Q9H4B4 646 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 MTHFD2LQ9H903 347 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 SSU72Q9NP77 194 aaKnown RBP9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 AIG1Q9NVV5 245 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 RLIMQ9NVW2 624 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 KCNS2Q9ULS6 477 aa9.53□□□□□ -0.88
SPTLC1P4-201ENST00000435997 LOC390937A0A1W2PQ73 354 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TMEM229AB2RXF0 380 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 FTCDNL1E5RQL4 147 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TM9SF1O15321 606 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 LGI1O95970 557 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 DBIP07108 87 aaKnown RBP9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 CECR9P0C854 216 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 IL7RP16871 459 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SERPINF1P36955 418 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SLC1A6P48664 564 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SELENOPP49908 381 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 PPOXP50336 477 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ANXA11P50995 505 aaKnown RBP9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 UFM1P61960 85 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 NAAAQ02083 359 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 LGALS3BPQ08380 585 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 LRRC74AQ0VAA2 488 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 GNA13Q14344 377 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 GGTLC2Q14390 218 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ZSWIM7Q19AV6 140 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 LIN52Q52LA3 116 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 TNFAIP8L3Q5GJ75 292 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 FAM120AOSQ5T036 256 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 ARFGEF3Q5TH69 2177 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 CREB3L2Q70SY1 520 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 AAED1Q7RTV5 226 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 EPHX4Q8IUS5 362 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 NUP37Q8NFH4 326 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 FBXO17Q96EF6 278 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 PANX1Q96RD7 426 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 SOX7Q9BT81 388 aa9.52□□□□□ -0.89
SPTLC1P4-201ENST00000435997 PTDSS2Q9BVG9 487 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms