RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 KLK2P20151 261 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 AGTR1P30556 359 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 KIR2DL2P43627 348 aaPredicted RBP13.84□□□□□ -0.19
TREX1-201ENST00000433541 PIN1Q13526 163 aaPredicted RBP13.84□□□□□ -0.19
TREX1-201ENST00000433541 DNAL1Q4LDG9 190 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 FAM69AQ5T7M9 428 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 SP5Q6BEB4 398 aaPredicted RBP13.84□□□□□ -0.19
TREX1-201ENST00000433541 HIST2H2BCQ6DN03 193 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 CYP2R1Q6VVX0 501 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 MEX3BQ6ZN04 569 aaKnown RBP13.84□□□□□ -0.19
TREX1-201ENST00000433541 CCDC103Q8IW40 242 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 LRGUKQ96M69 825 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 ZNF300Q96RE9 604 aaPredicted RBP13.84□□□□□ -0.19
TREX1-201ENST00000433541 PSD2Q9BQI7 771 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 FNDC11Q9BVV2 318 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 ASPNQ9BXN1 380 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 POLR2J2Q9GZM3 115 aaKnown RBP13.84□□□□□ -0.19
TREX1-201ENST00000433541 POLR2J3Q9H1A7 115 aaKnown RBP13.84□□□□□ -0.19
TREX1-201ENST00000433541 C1orf21Q9H246 121 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 TAS2R1Q9NYW7 299 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 CD300AQ9UGN4 299 aa13.84□□□□□ -0.19
TREX1-201ENST00000433541 C19orf84I3L1E1 186 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 OR5F1O95221 314 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 UMPSP11172 480 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 RASSF2P50749 326 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 CBX1P83916 185 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 ABLIM2Q6H8Q1 611 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 PAQR6Q6TCH4 344 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 GDF7Q7Z4P5 450 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 KIF18BQ86Y91 864 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 ZNF100Q8IYN0 542 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 TMEM99Q8N816 258 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 MFSD8Q8NHS3 518 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 RNASE6Q93091 150 aaKnown RBP13.83□□□□□ -0.2
TREX1-201ENST00000433541 MCUR1Q96AQ8 359 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 STARD4Q96DR4 205 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 MPP4Q96JB8 637 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 PRRC1Q96M27 445 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 GORASP2Q9H8Y8 452 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 FANCFQ9NPI8 374 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 DCAF13Q9NV06 445 aaKnown RBP13.83□□□□□ -0.2
TREX1-201ENST00000433541 RHCGQ9UBD6 479 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 RIMS3Q9UJD0 308 aa13.83□□□□□ -0.2
TREX1-201ENST00000433541 NOSIPQ9Y314 301 aaKnown RBP13.83□□□□□ -0.2
TREX1-201ENST00000433541 hCG_2039718K7EN88 272 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 GPR171O14626 319 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 MSTNO14793 375 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 EGR4Q05215 589 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 ST3GAL3Q11203 375 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 SNTB1Q13884 538 aaKnown RBP13.82□□□□□ -0.2
TREX1-201ENST00000433541 MFSD13AQ14CX5 517 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 CASP12Q6UXS9 341 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 GALNT5Q7Z7M9 940 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 DHFR2Q86XF0 187 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 UBE2J2Q8N2K1 259 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 ZNF610Q8N9Z0 462 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 TAAR8Q969N4 342 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 CLPTM1LQ96KA5 538 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 TMEM43Q9BTV4 400 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 AMBRA1Q9C0C7 1298 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 GP6Q9HCN6 339 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 GALNT8Q9NY28 637 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 FOXD3Q9UJU5 478 aaPredicted RBP13.82□□□□□ -0.2
TREX1-201ENST00000433541 FREM1Q5H8C1 2179 aa13.82□□□□□ -0.2
TREX1-201ENST00000433541 IGKV1D-42A0A075B6H8 117 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 AQP7P3A6NL99 342 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 ZNF814B7Z6K7 855 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 J3KTA2 159 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 M0R082 166 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 RAMP1O60894 148 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 NPIPB7O75200 414 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 HIST1H2ABP04908 130 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 CD8BP10966 210 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 POU2F1P14859 743 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 GRPRP30550 384 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 PMS2P3Q13401 168 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 C1DQ13901 141 aaKnown RBP13.81□□□□□ -0.2
TREX1-201ENST00000433541 WDR88Q6ZMY6 472 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 HIST3H2AQ7L7L0 130 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 RRM2BQ7LG56 351 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.81□□□□□ -0.2
TREX1-201ENST00000433541 NUFIP2Q7Z417 695 aaKnown RBP13.81□□□□□ -0.2
TREX1-201ENST00000433541 ZNF417Q8TAU3 575 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 TMEM255BQ8WV15 326 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 HIST1H2ACQ93077 130 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 PYURFQ96I23 114 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 ZNF587Q96SQ5 575 aaPredicted RBP13.81□□□□□ -0.2
TREX1-201ENST00000433541 BTBD10Q9BSF8 475 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 PTDSS2Q9BVG9 487 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 TRIM15Q9C019 465 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 KLHL4Q9C0H6 718 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 MUC13Q9H3R2 512 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 NPDC1Q9NQX5 325 aaPredicted RBP13.81□□□□□ -0.2
TREX1-201ENST00000433541 ACTR3BQ9P1U1 418 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 PKDREJQ9NTG1 2253 aa13.81□□□□□ -0.2
TREX1-201ENST00000433541 ZNF724A8MTY0 619 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 A8MXE2 369 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 MRPL33O75394 65 aaKnown RBP13.8□□□□□ -0.2
TREX1-201ENST00000433541 SERPINI2O75830 405 aa13.8□□□□□ -0.2
TREX1-201ENST00000433541 ATP5HO75947 161 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms