RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 MTHFD2LQ9H903 347 aaPredicted RBP12.98□□□□□ -0.33
PRKDC-203ENST00000432581 ROPN1Q9HAT0 212 aaPredicted RBP12.98□□□□□ -0.33
PRKDC-203ENST00000432581 CA10Q9NS85 328 aa12.98□□□□□ -0.33
PRKDC-203ENST00000432581 BTNL2Q9UIR0 455 aa12.98□□□□□ -0.33
PRKDC-203ENST00000432581 IGHV1-18A0A0C4DH31 117 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 IGHV4-61A0A0C4DH41 118 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 AQP7P3A6NL99 342 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 ZNF587BE7ETH6 402 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 E9PBE3 544 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 KLF11O14901 512 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 SNUPNO95149 360 aaKnown RBP12.97□□□□□ -0.33
PRKDC-203ENST00000432581 AKR7A3O95154 331 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 VAMP5O95183 116 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 CRYAAP02489 173 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 SERPINE1P05121 402 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 DBIP07108 87 aaKnown RBP12.97□□□□□ -0.33
PRKDC-203ENST00000432581 CHRM4P08173 479 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 RPS4Y1P22090 263 aaKnown RBP12.97□□□□□ -0.33
PRKDC-203ENST00000432581 CXCR1P25024 350 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 S100A3P33764 101 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 ETV4P43268 484 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 UBE2NP61088 152 aaKnown RBP12.97□□□□□ -0.33
PRKDC-203ENST00000432581 CEACAM7Q14002 265 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 OR7A5Q15622 319 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 SYPL1Q16563 259 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 C3orf36Q3SXR2 165 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 TBRG1Q3YBR2 411 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 IQCCQ4KMZ1 466 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 MRPL2Q5T653 305 aaKnown RBP12.97□□□□□ -0.33
PRKDC-203ENST00000432581 IL17RELQ6ZVW7 336 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 KIRREL3Q8IZU9 778 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 TMEM99Q8N816 258 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 ZNF781Q8N8C0 355 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 ANKFN1Q8N957 763 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 C3orf49Q96BT1 292 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 AURKBQ96GD4 344 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-203ENST00000432581 FOXN4Q96NZ1 517 aa12.97□□□□□ -0.33
PRKDC-203ENST00000432581 ZNF385AQ96PM9 386 aaKnown RBP12.97□□□□□ -0.33
PRKDC-203ENST00000432581 VRK1Q99986 396 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-203ENST00000432581 ITM2AO43736 263 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 TYROBPO43914 113 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 TGFAP01135 160 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 ZNF23P17027 643 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 PPOXP50336 477 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 ABCE1P61221 599 aaKnown RBP12.96□□□□□ -0.33
PRKDC-203ENST00000432581 EFNB3Q15768 340 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 FAM174BQ3ZCQ3 159 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 LIPNQ5VXI9 398 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 TMEM225Q6GV28 225 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 SPATA19Q7Z5L4 167 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 GPAT4Q86UL3 456 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 PEX5LQ8IYB4 626 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 OR1K1Q8NGR3 316 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 MAGEE2Q8TD90 523 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-203ENST00000432581 TAPBPLQ9BX59 468 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 PLK3Q9H4B4 646 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 CRNNQ9UBG3 495 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-203ENST00000432581 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-203ENST00000432581 RAP2CQ9Y3L5 183 aa12.96□□□□□ -0.33
PRKDC-203ENST00000432581 YLPM1P49750 1951 aaKnown RBP12.95□□□□□ -0.34
PRKDC-203ENST00000432581 ARPC4-TTLL3A0A0A6YYG9 625 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 CCDC154A6NI56 674 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 A8MVM7 634 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 LGI1O95970 557 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 ERCC1P07992 297 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-203ENST00000432581 OR4A8P0C604 315 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 NR2F1P10589 423 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 HOXB1P14653 301 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-203ENST00000432581 CREB1P16220 341 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 LBPP18428 481 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 RPL14P50914 215 aaKnown RBP12.95□□□□□ -0.34
PRKDC-203ENST00000432581 COPZ1P61923 177 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 NAAAQ02083 359 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 LRRC74AQ0VAA2 488 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 CHI3L2Q15782 390 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 ADIPOQQ15848 244 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 ANKRD16Q6P6B7 361 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 FAM169BQ8N8A8 192 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 ANKS4BQ8N8V4 417 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 OR4F15Q8NGB8 312 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 PKNOX2Q96KN3 472 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 PANX1Q96RD7 426 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 BPESC1Q9GZL8 116 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 RAB1BQ9H0U4 201 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 MALRD1Q5VYJ5 2156 aa12.95□□□□□ -0.34
PRKDC-203ENST00000432581 ARFGEF3Q5TH69 2177 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 HEATR1Q9H583 2144 aaKnown RBP12.94□□□□□ -0.34
PRKDC-203ENST00000432581 A0A096LPI6 279 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 VSTM5A8MXK1 200 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 BIRC5O15392 142 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 PGRP06401 933 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 SELENOPP49908 381 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 IDH3GP51553 393 aaPredicted RBP12.94□□□□□ -0.34
PRKDC-203ENST00000432581 P2RY4P51582 365 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 SH3BGRP55822 239 aaPredicted RBP12.94□□□□□ -0.34
PRKDC-203ENST00000432581 ZSWIM7Q19AV6 140 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 CR1LQ2VPA4 569 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 LIN52Q52LA3 116 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 WBP2NLQ6ICG8 309 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 CREB3L2Q70SY1 520 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms