RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 HIST2H2AA3Q6FI13 130 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 FAM198BQ6UWH4 519 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SERPINA13PQ6UXR4 307 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 LIPIQ6XZB0 460 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 C3P1Q6ZMU1 363 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 ERN2Q76MJ5 926 aaKnown RBP7.43□□□□□ -1.22
VTI1A-202ENST00000432306 C6orf120Q7Z4R8 191 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 VASH2Q86V25 355 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 IQCHQ86VS3 1027 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 RBM45Q8IUH3 476 aaKnown RBP7.43□□□□□ -1.22
VTI1A-202ENST00000432306 GID4Q8IVV7 300 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 TRAM1L1Q8N609 369 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 OR6M1Q8NGM8 313 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 WDR48Q8TAF3 677 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 DUSP19Q8WTR2 217 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SETD7Q8WTS6 366 aaKnown RBP7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SCARB1Q8WTV0 552 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SPRYD4Q8WW59 207 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SMPDL3AQ92484 453 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 OSTF1Q92882 214 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 ARHGDIGQ99819 225 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 TMED9Q9BVK6 235 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 FNDC11Q9BVV2 318 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 TM6SF2Q9BZW4 377 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SLAMF7Q9NQ25 335 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 IFT46Q9NQC8 304 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 MARCH5Q9NX47 278 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 AHSPQ9NZD4 102 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 OR6C2Q9NZP2 312 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 CNIH4Q9P003 139 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 PIPOXQ9P0Z9 390 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SEC14L3Q9UDX4 400 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 CYB5R1Q9UHQ9 305 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 CA5BQ9Y2D0 317 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SPACA6W5XKT8 324 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 A0A1B0GWJ7 208 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 PRAMEF27A3QJZ7 478 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 SMIM30A4D0T7 59 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 HIDE1A8MVS5 230 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 SNRPGP15A8MWD9 76 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 WASH3PC4AMC7 463 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 EEF1E1O43324 174 aaKnown RBP7.42□□□□□ -1.22
VTI1A-202ENST00000432306 RGS11O94810 467 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 HMGN1P05114 100 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 CYC1P08574 325 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 SOAT1P35610 550 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 MNDAP41218 407 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 KHKP50053 298 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 DGKEP52429 567 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 KIAA1024LP59773 190 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 RAP2BP61225 183 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 SNRPD1P62314 119 aaKnown RBP7.42□□□□□ -1.22
VTI1A-202ENST00000432306 FLI1Q01543 452 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-202ENST00000432306 TDGQ13569 410 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 SLBPQ14493 270 aaKnown RBP eCLIP7.42□□□□□ -1.22
VTI1A-202ENST00000432306 IDNKQ5T6J7 187 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 KIAA1161Q6NSJ0 714 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 TMEM64Q6YI46 380 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 ASB18Q6ZVZ8 466 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 ADCK2Q7Z695 626 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 TMPRSS11BQ86T26 416 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 LHFPL3Q86UP9 236 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 MCATQ8IVS2 390 aaKnown RBP7.42□□□□□ -1.22
VTI1A-202ENST00000432306 SIAH3Q8IW03 269 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF679Q8IYX0 411 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 OR6V1Q8N148 313 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 FTMTQ8N4E7 242 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 ACBD7Q8N6N7 88 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF565Q8N9K5 539 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 OR2T35Q8NGX2 323 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 WFDC5Q8TCV5 224 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF480Q8WV37 535 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 SKA2Q8WVK7 121 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-202ENST00000432306 PHYHIPQ92561 330 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 WBP2Q969T9 261 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 LMLNQ96KR4 655 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 LMF1Q96S06 567 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 RHBGQ9H310 441 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 OR51B5Q9H339 312 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 TBC1D17Q9HA65 648 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 TRIM36Q9NQ86 728 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 MIEF1Q9NQG6 463 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 ZC4H2Q9NQZ6 224 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 HCN3Q9P1Z3 774 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 ADAM29Q9UKF5 820 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 ZFR2Q9UPR6 939 aaKnown RBP7.42□□□□□ -1.22
VTI1A-202ENST00000432306 RASD1Q9Y272 281 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 HS3ST2Q9Y278 367 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 PRELID3BQ9Y3B1 194 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 HCFC2Q9Y5Z7 792 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 VPS13AQ96RL7 3174 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 VWA8A3KMH1 1905 aa7.42□□□□□ -1.22
VTI1A-202ENST00000432306 BAHCC1Q9P281 2608 aa7.41□□□□□ -1.22
VTI1A-202ENST00000432306 C2orf92A0A1B0GVN3 265 aa7.41□□□□□ -1.22
VTI1A-202ENST00000432306 SERTM2A0A1B0GWG4 89 aa7.41□□□□□ -1.22
VTI1A-202ENST00000432306 TSPAN11A1L157 253 aa7.41□□□□□ -1.22
VTI1A-202ENST00000432306 TRABD2BA6NFA1 517 aa7.41□□□□□ -1.22
VTI1A-202ENST00000432306 CD8B2A6NJW9 211 aa7.41□□□□□ -1.22
VTI1A-202ENST00000432306 MCRIP1C9JLW8 97 aa7.41□□□□□ -1.22
VTI1A-202ENST00000432306 LRRN3E7EW58 273 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms