RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ENPP1P22413 925 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 EVI2BP34910 448 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 TMEM102Q8N9M5 508 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 C9orf43Q8TAL5 461 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 S100A16Q96FQ6 103 aaKnown RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 PGAM5Q96HS1 289 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 SAMD8Q96LT4 415 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 FEVQ99581 238 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 LRFN3Q9BTN0 628 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 NUDT9Q9BW91 350 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 ENAMQ9NRM1 1142 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 TCFL5Q9UL49 500 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 TEX13CA0A0J9YWL9 993 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 TOXO94900 526 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 RBM34P42696 430 aaKnown RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 LSSP48449 732 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 IL10RAQ13651 578 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 JMJD6Q6NYC1 403 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 LANCL3Q6ZV70 420 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 LHFPL3Q86UP9 236 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 STOML3Q8TAV4 291 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 SCARF2Q96GP6 870 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 USB1Q9BQ65 265 aaKnown RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 ST14Q9Y5Y6 855 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 PRRG2O14669 202 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 C1QAP02745 245 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 IRF2P14316 349 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 EPHA1P21709 976 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 TMEM53Q6P2H8 277 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF793Q6ZN11 406 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 FCGR1BQ92637 280 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 ENKD1Q9H0I2 346 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 APMAPQ9HDC9 416 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 OR2S2Q9NQN1 319 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 KCNN3Q9UGI6 736 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 ABCG2Q9UNQ0 655 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 DISC1C4P0D8 188 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 H0YAE9 185 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 CRABP1P29762 137 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 GGT2P36268 569 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 OR1C1Q15619 314 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 PRSS41Q7RTY9 318 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 KIF18BQ86Y91 864 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 CDH20Q9HBT6 801 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 TMEM14AQ9Y6G1 99 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 CEP290O15078 2479 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 A0A1W2PPV9 198 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 UPK1AO00322 258 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 EEF1E1O43324 174 aaKnown RBP11.89□□□□□ -0.51
PTCH1-207ENST00000429896 UCNP55089 124 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 MALLQ13021 153 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 STK11Q15831 433 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 PITX2Q99697 317 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 C14orf119Q9NWQ9 140 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF705EA8MWA4 302 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-207ENST00000429896 ICOSLGO75144 302 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 SORBS2O94875 1100 aaKnown RBP11.89□□□□□ -0.51
PTCH1-207ENST00000429896 TFPTP0C1Z6 253 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 PNLIPRP2P54317 469 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 SLC10A1Q14973 349 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 SEC23BQ15437 767 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 COL28A1Q2UY09 1125 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 OR2Y1Q8NGV0 311 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 CNRIP1Q96F85 164 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-207ENST00000429896 RAB33BQ9H082 229 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 EXOSC1Q9Y3B2 195 aaKnown RBP11.89□□□□□ -0.51
PTCH1-207ENST00000429896 TVP23AA6NH52 213 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 SYT5O00445 386 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 SLC43A1O75387 559 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 ATP1B1P05026 303 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 OSMP13725 252 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 MS4A2Q01362 244 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 MAP4K2Q12851 820 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 PHC2Q8IXK0 858 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 ELMOD2Q8IZ81 293 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 ANKK1Q8NFD2 765 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 SPRYD4Q8WW59 207 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-207ENST00000429896 FOXN4Q96NZ1 517 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 AKR1C4P17516 323 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 PEBP1P30086 187 aaKnown RBP11.89□□□□□ -0.51
PTCH1-207ENST00000429896 ZNF517Q6ZMY9 492 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-207ENST00000429896 TMEM151AQ8N4L1 468 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 OR5W2Q8NH69 310 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 SCGB1C1Q8TD33 95 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 RFT1Q96AA3 541 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 WIF1Q9Y5W5 379 aa11.89□□□□□ -0.51
PTCH1-207ENST00000429896 TRAV36DV7A0A075B6V5 113 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 TRAV17A0A0B4J275 112 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 SERTM1A2A2V5 107 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 ATE1O95260 518 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 HPP00738 406 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 STOMP27105 288 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 LCN1P31025 176 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 FUNDC1Q8IVP5 155 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 GATA6Q92908 595 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 MROQ9BYG7 248 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 A0A0U1RQK1 487 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 SLC22A31A6NKX4 558 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 HMGN4O00479 90 aa11.88□□□□□ -0.51
PTCH1-207ENST00000429896 EIF1BO60739 113 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms