RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 GSTP1P09211 210 aaKnown RBP14.32□□□□□ -0.12
PTPRF-206ENST00000429895 B3GNT8Q7Z7M8 397 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 LINC00346Q8IVM7 164 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 SECTM1Q8WVN6 248 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 FER1L6-AS2Q96M78 137 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 SORT1Q99523 831 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 CLMPQ9H6B4 373 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 ASB4Q9Y574 426 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 BAZ2AQ9UIF9 1905 aaKnown RBP14.32□□□□□ -0.12
PTPRF-206ENST00000429895 WASH4PA8MWX3 477 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 UTS2O95399 124 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 NUDT7P0C024 238 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 CHRNB1P11230 501 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 DPP4P27487 766 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 LGALS4P56470 323 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 TAZQ16635 292 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 SLC36A2Q495M3 483 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 MPP7Q5T2T1 576 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 B3GLCTQ6Y288 498 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 BPIFB2Q8N4F0 458 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 UPRTQ96BW1 309 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 TPPP3Q9BW30 176 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 SAMD10Q9BYL1 202 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 TREX1Q9NSU2 369 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 GPR137BO60478 399 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 PRAMEF4O60810 478 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 KCNK5O95279 499 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 SNRNP70P08621 437 aaKnown RBP14.31□□□□□ -0.12
PTPRF-206ENST00000429895 CLDN12P56749 244 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 MLF2Q15773 248 aaPredicted RBP14.31□□□□□ -0.12
PTPRF-206ENST00000429895 SLC5A12Q1EHB4 618 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 C18orf63Q68DL7 685 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 HBMQ6B0K9 141 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 SLC35F3Q8IY50 421 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF687Q8N1G0 1237 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 NKX3-1Q99801 234 aaPredicted RBP14.31□□□□□ -0.12
PTPRF-206ENST00000429895 PDLIM7Q9NR12 457 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 GAPDHSO14556 408 aaPredicted RBP14.31□□□□□ -0.12
PTPRF-206ENST00000429895 IGHEP01854 428 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 RNF4P78317 190 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 UBE2NLQ5JXB2 153 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 APOOLQ6UXV4 268 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 SMIM15Q7Z3B0 74 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 ANKLE1Q8NAG6 615 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 OR13C9Q8NGT0 318 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 C1orf198Q9H425 327 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF891A8MT65 544 aaPredicted RBP14.31□□□□□ -0.12
PTPRF-206ENST00000429895 FBXO24O75426 580 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 IVDP26440 423 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 SSTR2P30874 369 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 SNCAP37840 140 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 SELPLGQ14242 412 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 CDCP1Q9H5V8 836 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 BABAM2Q9NXR7 383 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 CSNK1DP48730 415 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 TAS2R19P59542 299 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 SSTP61278 116 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 CLDN10P78369 228 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 C14orf28Q4W4Y0 310 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 OR2G6Q5TZ20 316 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 FAM83HQ6ZRV2 1179 aaPredicted RBP14.31□□□□□ -0.12
PTPRF-206ENST00000429895 BATF2Q8N1L9 274 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 GTF2H4Q92759 462 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 ACOD1A6NK06 481 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 RNF212BA8MTL3 300 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 SLC2A1P11166 492 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF92Q03936 586 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 CDONQ4KMG0 1287 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 RNLSQ5VYX0 342 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 RTL6Q6ICC9 239 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 MRI1Q9BV20 369 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF281Q9Y2X9 895 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 GPR45Q9Y5Y3 372 aa14.31□□□□□ -0.12
PTPRF-206ENST00000429895 NXPH2O95156 264 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ABHD16AO95870 558 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 NPBWR1P48145 328 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 SLC35A1P78382 337 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 BAXQ07812 192 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 MARCH8Q5T0T0 291 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF836Q6ZNA1 936 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ZADH2Q8N4Q0 377 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 RBMXL1Q96E39 390 aaKnown RBP14.3□□□□□ -0.12
PTPRF-206ENST00000429895 GALNT9Q9HCQ5 603 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 TMEM72A0PK05 275 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 NFYBP25208 207 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 EDDM3AQ14507 147 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 MED25Q71SY5 747 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 LKAAEAR1Q8TD35 194 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF597Q96LX8 424 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 TMEM59Q9BXS4 323 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ANKRD60Q9BZ19 345 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 SELENOIQ9C0D9 397 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ENPP5Q9UJA9 477 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 SLC22A7Q9Y694 548 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 TMED7-TICAM2A0A0A6YYA0 188 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF705GA8MUZ8 300 aaPredicted RBP14.3□□□□□ -0.12
PTPRF-206ENST00000429895 IGHV3-9P01782 118 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 GRPP07492 148 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 CATR1Q13166 79 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 TBPL2Q6SJ96 375 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms