RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 LRRC28Q86X40 367 aaPredicted RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 PRR22Q8IZ63 422 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 FTMTQ8N4E7 242 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 CSNK1A1LQ8N752 337 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 ZNF676Q8N7Q3 588 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 GAL3ST3Q96A11 431 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 MSLNLQ96KJ4 702 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 ADAD1Q96M93 576 aaKnown RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 DERL3Q96Q80 235 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 ABHD1Q96SE0 405 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 AICDAQ9GZX7 198 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 AUNIPQ9H7T9 357 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 BCL2L10Q9HD36 194 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 NPAP1Q9NZP6 1156 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 A0A1B0GWA3 101 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 RRP8O43159 456 aaKnown RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 ZNF780AO75290 641 aaPredicted RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 ARL6IP5O75915 188 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 EFEMP2O95967 443 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 RPS15AP62244 130 aaKnown RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 TRA2BP62995 288 aaKnown RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 SNRPNP63162 240 aaKnown RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 TNFRSF17Q02223 184 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 SLC6A19Q695T7 634 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 HBMQ6B0K9 141 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 TMPRSS12Q86WS5 348 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 RDH10Q8IZV5 341 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 LGALS14Q8TCE9 139 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 HCAR2Q8TDS4 363 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 TSEN15Q8WW01 171 aaKnown RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 APOBEC4Q8WW27 367 aaKnown RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 SLC22A18Q96BI1 424 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 ZNF707Q96C28 371 aaPredicted RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 ARL5BQ96KC2 179 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 WDFY2Q96P53 400 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 CDCA3Q99618 268 aaPredicted RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 PNO1Q9NRX1 252 aaKnown RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 DZANK1Q9NVP4 752 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 SLC23A1Q9UHI7 598 aa7.44□□□□□ -1.22
HPS4-205ENST00000429411 MN1Q10571 1320 aaPredicted RBP7.44□□□□□ -1.22
HPS4-205ENST00000429411 HELZP42694 1942 aaKnown RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 CDC14CA4D256 554 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ELOA3DA6NLF2 546 aaPredicted RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 ANXA2P2A6NMY6 339 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 SELENOFO60613 162 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 CTSVO60911 334 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 TCRBP04435 133 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ANXA2P07355 339 aaKnown RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 ARL4DP49703 201 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 FBXW4P57775 412 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ZP2Q05996 745 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 GPR18Q14330 331 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ITPRIPL2Q3MIP1 535 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ELOA3BQ3SY89 546 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 CCDC157Q569K6 752 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 TMEM64Q6YI46 380 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 TMEM91Q6ZNR0 172 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 LHFPL2Q6ZUX7 228 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 FCRLAQ7L513 359 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ZAR1Q86SH2 424 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 CCDC28AQ8IWP9 274 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ETFBKMTQ8IXQ9 262 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 RFLNBQ8N5W9 214 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ZNF321PQ8N8H1 164 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 DNAAF1Q8NEP3 725 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ELOA3Q8NG57 546 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 OR5M3Q8NGP4 307 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 OR6N2Q8NGY6 317 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 SFXN5Q8TD22 340 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 RASD2Q96D21 266 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 NARS2Q96I59 477 aaKnown RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 HYLS1Q96M11 299 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 AIFM2Q9BRQ8 373 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 METTL17Q9H7H0 456 aaPredicted RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 TMEM74BQ9NUR3 256 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 OBP2AQ9NY56 170 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 RDH8Q9NYR8 311 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ACTR10Q9NZ32 417 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 NBASA2RRP1 2371 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 MDC1Q14676 2089 aaKnown RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 FXYD6-FXYD2A0A087WZ82 144 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 NUDT19A8MXV4 375 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 KDM4EB2RXH2 506 aaPredicted RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 SYT5O00445 386 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 IMPA2O14732 288 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ARPC1BO15143 372 aaKnown RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 NUPL2O15504 423 aaKnown RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 BRINP1O60477 761 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ALX3O95076 343 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ADH1BP00325 375 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 SBK2P0C263 348 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 OR8G3PP0DMU2 310 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 GRK6P43250 576 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 POLR2GP62487 172 aaKnown RBP eCLIP7.43□□□□□ -1.22
HPS4-205ENST00000429411 SMAD2Q15796 467 aaKnown RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 CDONQ4KMG0 1287 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 LEG1Q6P5S2 330 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ZSCAN1Q8NBB4 408 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 MFSD9Q8NBP5 474 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 TNFAIP8L1Q8WVP5 186 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms