RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 MELKQ14680 651 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 C3orf38Q5JPI3 329 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 HES5Q5TA89 166 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 AADACL4Q5VUY2 407 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 PTCRAQ6ISU1 281 aaPredicted RBP7.67□□□□□ -1.18
CD44-208ENST00000428726 SLC35F3Q8IY50 421 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 OR6C4Q8NGE1 309 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 SMPDL3BQ92485 455 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 OSTF1Q92882 214 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 KTI12Q96EK9 354 aaPredicted RBP7.67□□□□□ -1.18
CD44-208ENST00000428726 OR14A2Q96R54 314 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 ZNF350Q9GZX5 532 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 SEMA6CQ9H3T2 930 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 FGF20Q9NP95 211 aaPredicted RBP7.67□□□□□ -1.18
CD44-208ENST00000428726 POT1Q9NUX5 634 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 POMT2Q9UKY4 750 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 COPS3Q9UNS2 423 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 POLEQ07864 2286 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 OR6C68A6NDL8 312 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ZNF670-ZNF695F2Z2N8 137 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ZNF749O43361 778 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 BRINP1O60477 761 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ICOSLGO75144 302 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 MPZL1O95297 269 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 TFP02787 698 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ADRB1P08588 477 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 CD3GP09693 182 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 OR8G3PP0DMU2 310 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 S100A1P23297 94 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 FPR3P25089 353 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 PRSS12P56730 875 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 EIPR1Q53HC9 387 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 FHL5Q5TD97 284 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ZNF544Q6NX49 715 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 SLC25A45Q8N413 288 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 YIPF7Q8N8F6 280 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 OR5H6Q8NGV6 325 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 CYYR1Q96J86 154 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 LYRM4Q9HD34 91 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 IKZF2Q9UKS7 526 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 HSPB11Q9Y547 144 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ENTPD2Q9Y5L3 495 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 PRR32B1ATL7 298 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ARHGEF9O43307 516 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 CPEP16870 476 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ACAA2P42765 397 aaKnown RBP7.66□□□□□ -1.18
CD44-208ENST00000428726 TATDN3Q17R31 274 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 TMEM44Q2T9K0 475 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ARHGAP40Q5TG30 622 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 LEG1Q6P5S2 330 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 TMEM91Q6ZNR0 172 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 Q8N402 240 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 LNX2Q8N448 690 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 ACBD7Q8N6N7 88 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 POGLUT1Q8NBL1 392 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 OR1L3Q8NH93 324 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 SNX33Q8WV41 574 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 GHSRQ92847 366 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 SNAPC3Q92966 411 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 PDE7BQ9NP56 450 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 KRCC1Q9NPI7 259 aaPredicted RBP7.66□□□□□ -1.18
CD44-208ENST00000428726 DNAJB12Q9NXW2 375 aaKnown RBP7.66□□□□□ -1.18
CD44-208ENST00000428726 IL20Q9NYY1 176 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 RASD1Q9Y272 281 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 SIGLEC7Q9Y286 467 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 EXOSC1Q9Y3B2 195 aaKnown RBP7.66□□□□□ -1.18
CD44-208ENST00000428726 CMAHPQ9Y471 501 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 CDH10Q9Y6N8 788 aa7.66□□□□□ -1.18
CD44-208ENST00000428726 TMEM129A0AVI4 362 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 TMEM72A0PK05 275 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 KDM4EB2RXH2 506 aaPredicted RBP7.65□□□□□ -1.18
CD44-208ENST00000428726 CLDN4O14493 209 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 DBIP07108 87 aaKnown RBP7.65□□□□□ -1.18
CD44-208ENST00000428726 THBS1P07996 1170 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 CELA2AP08217 269 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 DRD5P21918 477 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 FZD5Q13467 585 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 GPR50Q13585 617 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 MANEAQ5SRI9 462 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 STPG1Q5TH74 334 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 VASNQ6EMK4 673 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 KLHL36Q8N4N3 616 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 OR10AC1Q8NH08 325 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 OR5W2Q8NH69 310 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 DUSP19Q8WTR2 217 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 THEM6Q8WUY1 208 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 RFKQ969G6 155 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 DERL3Q96Q80 235 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 EMC6Q9BV81 110 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 MCCC2Q9HCC0 563 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 Q9N2J8 555 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 ISYNA1Q9NPH2 558 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 MCUBQ9NWR8 336 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 FAM240BA0A1B0GVZ2 78 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 ELOA3DA6NLF2 546 aaPredicted RBP7.65□□□□□ -1.18
CD44-208ENST00000428726 RIIAD1A6NNX1 92 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 EEF1E1O43324 174 aaKnown RBP7.65□□□□□ -1.18
CD44-208ENST00000428726 PRKCAP17252 672 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 CSF2RBP32927 897 aa7.65□□□□□ -1.18
CD44-208ENST00000428726 ARRB1P49407 418 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms