RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TRPC5OSA6NMA1 111 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 ATP6V1G2-DDX39BF2Z307 99 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 FRS3O43559 492 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 NPIPB7O75200 414 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 IL6P05231 212 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 ZCCHC18P0CG32 403 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 IDO1P14902 403 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 HOXB9P17482 250 aaPredicted RBP13.57□□□□□ -0.24
SEC13-210ENST00000428626 CRATP43155 626 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 ANXA11P50995 505 aaKnown RBP13.57□□□□□ -0.24
SEC13-210ENST00000428626 FABP6P51161 128 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 MAP2K6P52564 334 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 HOXC5Q00444 222 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 LRRC74AQ0VAA2 488 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 NRF1Q16656 503 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 GSTA3Q16772 222 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 LIN52Q52LA3 116 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 HIKESHIQ53FT3 197 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 CXXC5Q7LFL8 322 aaKnown RBP13.57□□□□□ -0.24
SEC13-210ENST00000428626 AAED1Q7RTV5 226 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 SERPINA11Q86U17 422 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 FBXL14Q8N1E6 418 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 CADM2Q8N3J6 435 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 C1orf162Q8NEQ5 155 aaPredicted RBP13.57□□□□□ -0.24
SEC13-210ENST00000428626 NANOS1Q8WY41 292 aaKnown RBP13.57□□□□□ -0.24
SEC13-210ENST00000428626 C3orf49Q96BT1 292 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 TMEM19Q96HH6 336 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 SDR39U1Q9NRG7 319 aaPredicted RBP13.57□□□□□ -0.24
SEC13-210ENST00000428626 PARPBPQ9NWS1 579 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 P2RX2Q9UBL9 471 aa13.57□□□□□ -0.24
SEC13-210ENST00000428626 TMEM229AB2RXF0 380 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 KLF11O14901 512 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 TLX2O43763 284 aaPredicted RBP13.56□□□□□ -0.24
SEC13-210ENST00000428626 ZNF500O60304 480 aaPredicted RBP13.56□□□□□ -0.24
SEC13-210ENST00000428626 GPIP06744 558 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 CDH2P19022 906 aaPredicted RBP13.56□□□□□ -0.24
SEC13-210ENST00000428626 CXCR1P25024 350 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 MPGP29372 298 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 SELENOPP49908 381 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 NUDT6P53370 316 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 DSTNP60981 165 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 GNA13Q14344 377 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 MST1LQ2TV78 715 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 RNF220Q5VTB9 566 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 WBP2NLQ6ICG8 309 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 GPAT4Q86UL3 456 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 COMTD1Q86VU5 262 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 EPHX4Q8IUS5 362 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 ZNF440Q8IYI8 595 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 C10orf111Q8N326 155 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 C17orf78Q8N4C9 275 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 ADAD1Q96M93 576 aaKnown RBP13.56□□□□□ -0.24
SEC13-210ENST00000428626 RHNO1Q9BSD3 238 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 PTDSS2Q9BVG9 487 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 SF3B5Q9BWJ5 86 aaKnown RBP13.56□□□□□ -0.24
SEC13-210ENST00000428626 ADPRHL2Q9NX46 363 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 ZIM2Q9NZV7 527 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 SEC14L4Q9UDX3 406 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 MOKQ9UQ07 419 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 AMDHD2Q9Y303 409 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 ATP23Q9Y6H3 246 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 MALRD1Q5VYJ5 2156 aa13.56□□□□□ -0.24
SEC13-210ENST00000428626 ELOA3DA6NLF2 546 aaPredicted RBP13.55□□□□□ -0.24
SEC13-210ENST00000428626 FTCDNL1E5RQL4 147 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 H7C417 338 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 TP53P04637 393 aaPredicted RBP13.55□□□□□ -0.24
SEC13-210ENST00000428626 CRISP3P54108 245 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 MAGOHP61326 146 aaKnown RBP13.55□□□□□ -0.24
SEC13-210ENST00000428626 EGR4Q05215 589 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 ELOA3BQ3SY89 546 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 C1orf140Q5VVS0 124 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 ZNF544Q6NX49 715 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 SLC2A7Q6PXP3 512 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 HIPK1Q86Z02 1210 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 KDM8Q8N371 416 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 ELOA3Q8NG57 546 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 GTF2H4Q92759 462 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 MAL2Q969L2 176 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 TLCD1Q96CP7 247 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 BOD1Q96IK1 185 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 SPATA9Q9BWV2 254 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 PAIP1Q9H074 479 aaKnown RBP13.55□□□□□ -0.24
SEC13-210ENST00000428626 NELFAQ9H3P2 528 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 MANSC1Q9H8J5 431 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 PCDHB14Q9Y5E9 798 aa13.55□□□□□ -0.24
SEC13-210ENST00000428626 IGHV1-18A0A0C4DH31 117 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 A8MVM7 634 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 NR5A2O00482 541 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 UPK3AO75631 287 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 ANP32DO95626 131 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 LGI1O95970 557 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 UQCRBP14927 111 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 POLR2JP52435 117 aaKnown RBP13.54□□□□□ -0.24
SEC13-210ENST00000428626 SLC18A1P54219 525 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 RAB35Q15286 201 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 RGNQ15493 299 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 SWI5Q1ZZU3 235 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 TMEM249Q2WGJ8 235 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 TBRG1Q3YBR2 411 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms