RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 C18orf12Q96KH6 178 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 GSX1Q9H4S2 264 aaPredicted RBP16.24■□□□□ 0.19
GPC1-205ENST00000427506 TMEM38AQ9H6F2 299 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 LAMP3Q9UQV4 416 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 GMEB1Q9Y692 573 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 FREM1Q5H8C1 2179 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 PRORSD1PA6NEY8 169 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 TMEM229AB2RXF0 380 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 SERPINB7O75635 380 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 AQP1P29972 269 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 ZNF672Q499Z4 452 aaPredicted RBP16.23■□□□□ 0.19
GPC1-205ENST00000427506 TSPO2Q5TGU0 170 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 OR7E24Q6IFN5 339 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 DHRS4L2Q6PKH6 230 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 PRSS57Q6UWY2 283 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 SEZ6L2Q6UXD5 910 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 HIPK4Q8NE63 616 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 KBTBD8Q8NFY9 601 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 RNF217Q8TC41 542 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 NEUROG1Q92886 237 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 TMEM45BQ96B21 275 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 Q96MF0 132 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 CPPED1Q9BRF8 314 aaPredicted RBP16.23■□□□□ 0.19
GPC1-205ENST00000427506 GSX2Q9BZM3 304 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 SLC7A10Q9NS82 523 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 ANGPT4Q9Y264 503 aa16.23■□□□□ 0.19
GPC1-205ENST00000427506 RAI1Q7Z5J4 1906 aaPredicted RBP16.22■□□□□ 0.19
GPC1-205ENST00000427506 A0A1W2PR80 420 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 TPST1O60507 370 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 TMCC2O75069 709 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 NPIPB7O75200 414 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 KRT33AO76009 404 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 VAMP5O95183 116 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 ITGA5P08648 1049 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 RPS5P46782 204 aaKnown RBP16.22■□□□□ 0.19
GPC1-205ENST00000427506 ZNF83P51522 516 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 FOXG1P55316 489 aaPredicted RBP16.22■□□□□ 0.19
GPC1-205ENST00000427506 RPS4XP62701 263 aaKnown RBP16.22■□□□□ 0.19
GPC1-205ENST00000427506 TGFBR3Q03167 851 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 NFYCQ13952 458 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 GABRA6Q16445 453 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 CYP51A1Q16850 503 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 KLHL17Q6TDP4 642 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 ARMC8Q8IUR7 673 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 MFSD8Q8NHS3 518 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 SMAP2Q8WU79 429 aaPredicted RBP16.22■□□□□ 0.19
GPC1-205ENST00000427506 ZNF385AQ96PM9 386 aaKnown RBP16.22■□□□□ 0.19
GPC1-205ENST00000427506 CGREF1Q99674 301 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 TRIM2Q9C040 744 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 PIF1Q9H611 641 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 ZNF385DQ9H6B1 395 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 NPAP1Q9NZP6 1156 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 SELENONQ9NZV5 590 aa16.22■□□□□ 0.19
GPC1-205ENST00000427506 A0A1B0GWA3 101 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 ABCD4O14678 606 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 INHBBP09529 407 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 ATP5J2P56134 94 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 RGS8P57771 180 aaPredicted RBP16.21■□□□□ 0.19
GPC1-205ENST00000427506 MTPNP58546 118 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 ADRM1Q16186 407 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 GLIPR1L2Q4G1C9 344 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 ALG10BQ5I7T1 473 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 METTL21CQ5VZV1 264 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 TMEM108Q6UXF1 575 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 BIVMQ86UB2 503 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.19
GPC1-205ENST00000427506 DPP10Q8N608 796 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 LSMEM1Q8N8F7 131 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 ZIC4Q8N9L1 334 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 POMGNT2Q8NAT1 580 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 C11orf65Q8NCR3 313 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 BHLHE22Q8NFJ8 381 aaPredicted RBP16.21■□□□□ 0.19
GPC1-205ENST00000427506 TSPEARQ8WU66 669 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 DNAJA4Q8WW22 397 aaPredicted RBP16.21■□□□□ 0.19
GPC1-205ENST00000427506 IGFBPL1Q8WX77 278 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 GTPBP3Q969Y2 492 aaKnown RBP16.21■□□□□ 0.19
GPC1-205ENST00000427506 KTI12Q96EK9 354 aaPredicted RBP16.21■□□□□ 0.19
GPC1-205ENST00000427506 ANKRD27Q96NW4 1050 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 MUS81Q96NY9 551 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 BDH2Q9BUT1 245 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 PRR14Q9BWN1 585 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 TMEM120AQ9BXJ8 343 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 RSPO3Q9BXY4 272 aaPredicted RBP16.21■□□□□ 0.19
GPC1-205ENST00000427506 SLCO5A1Q9H2Y9 848 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 C12orf10Q9HB07 376 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 TMEM27Q9HBJ8 222 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 RASD1Q9Y272 281 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 SLC25A15Q9Y619 301 aa16.21■□□□□ 0.19
GPC1-205ENST00000427506 DSCAMO60469 2012 aa16.21■□□□□ 0.18
GPC1-205ENST00000427506 MAP1AP78559 2803 aaPredicted RBP16.2■□□□□ 0.18
GPC1-205ENST00000427506 M0R1B8 84 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 TROVE2P10155 538 aaKnown RBP eCLIP16.2■□□□□ 0.18
GPC1-205ENST00000427506 PNMTP11086 282 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 CDH2P19022 906 aaPredicted RBP16.2■□□□□ 0.18
GPC1-205ENST00000427506 HTR2AP28223 471 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 MPGP29372 298 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 CDH11P55287 796 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 RBBP4Q09028 425 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 NIPAL3Q6P499 406 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 ULK3Q6PHR2 472 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms