RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 DNAL1Q4LDG9 190 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 IFI44LQ53G44 452 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 SYT14P1Q58G82 188 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 PDSS1Q5T2R2 415 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 RIPPLY2Q5TAB7 128 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 HBMQ6B0K9 141 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF613Q6PF04 617 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 ULK3Q6PHR2 472 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 TMPPEQ6ZT21 453 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 FKBP9P1Q75LS8 142 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 CHMP1BQ7LBR1 199 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 RANBP3LQ86VV4 465 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 EID3Q8N140 333 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 FAM86B1Q8N7N1 296 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 C9orf106Q8NAJ2 232 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 MBD3L2Q8NHZ7 208 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 ADAMTS16Q8TE57 1224 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 SLC25A43Q8WUT9 341 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 DNAJA4Q8WW22 397 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 LZICQ8WZA0 190 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 SLC47A1Q96FL8 570 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 CCDC120Q96HB5 630 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 PYURFQ96I23 114 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 NSMCE2Q96MF7 247 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 DOCK7Q96N67 2140 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 OR5B2Q96R09 309 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 PRSS27Q9BQR3 290 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 SRXN1Q9BYN0 137 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 PAQR5Q9NXK6 330 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 RPS6KB2Q9UBS0 482 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 MAGEL2Q9UJ55 1249 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 RIMS3Q9UJD0 308 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 RPS6KA6Q9UK32 745 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 A4GNTQ9UNA3 340 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 TRAPPC4Q9Y296 219 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 SLC9A8Q9Y2E8 581 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 HDGFL3Q9Y3E1 203 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 A0A0G2JNJ9 132 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 TRAPPC13A5PLN9 417 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 SLC22A20A6NK97 555 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 GJE1A6NN92 205 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 A8MVM7 634 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 J3KTA2 159 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 SULT2B1O00204 365 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 EBAG9O00559 213 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 FFAR1O14842 300 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 AQP8O94778 261 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 AGFG2O95081 481 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 PRSS23O95084 383 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 PMS2P2O95744 297 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 SEMG1P04279 462 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 PNMTP11086 282 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 ENPP1P22413 925 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 YAP1P46937 504 aaKnown RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 DIO1P49895 249 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 RASSF2P50749 326 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 LTBQ06643 244 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 TRAP1Q12931 704 aaKnown RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 FOXF2Q12947 444 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 MYBPHQ13203 477 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 PON3Q15166 354 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 CDSNQ15517 529 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 ALG10BQ5I7T1 473 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 LCN8Q6JVE9 175 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 MTFR2Q6P444 385 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 CYP2R1Q6VVX0 501 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 WDR88Q6ZMY6 472 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 ASRGL1Q7L266 308 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 GDF7Q7Z4P5 450 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 DHFR2Q86XF0 187 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 CCDC71Q8IV32 467 aaPredicted RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 LIX1LQ8IVB5 337 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 NKAIN4Q8IVV8 208 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 FAM26EQ8N5C1 309 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 NAXEQ8NCW5 288 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 FNDC9Q8TBE3 224 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 ITLN2Q8WWU7 325 aaPredicted RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 GEMIN6Q8WXD5 167 aaKnown RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 ROBO4Q8WZ75 1007 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 RND1Q92730 232 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 DDIT4LQ96D03 193 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 ASB9Q96DX5 294 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 KTI12Q96EK9 354 aaPredicted RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 DNAJA3Q96EY1 480 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 SLC41A3Q96GZ6 507 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 PTDSS2Q9BVG9 487 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 POLR2J2Q9GZM3 115 aaKnown RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 POLR2J3Q9H1A7 115 aaKnown RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 MUC13Q9H3R2 512 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 RNF122Q9H9V4 155 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 Q9UFV3 132 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 SLC7A7Q9UM01 511 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 SAMD4AQ9UPU9 718 aaKnown RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 RNF6Q9Y252 685 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF175Q9Y473 711 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 SPIN1Q9Y657 262 aaPredicted RBP6.62□□□□□ -1.35
LINC01049-201ENST00000426840 U3KQE9 123 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 RELNP78509 3460 aa6.62□□□□□ -1.35
LINC01049-201ENST00000426840 INTS1Q8N201 2190 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms