RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ALX3O95076 343 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 GPR89BP0CG08 455 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 MYF5P13349 255 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 ELOAQ14241 798 aaKnown RBP12.3□□□□□ -0.44
USP42-203ENST00000426246 ELOA3BQ3SY89 546 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 SCGB2B2Q4G0G5 96 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 LRRC69Q6ZNQ3 347 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 ZNF627Q7L945 461 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 ELOA3Q8NG57 546 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 PPP1R3EQ9H7J1 279 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 MEPEQ9NQ76 525 aaPredicted RBP12.3□□□□□ -0.44
USP42-203ENST00000426246 IL20Q9NYY1 176 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 SLC22A31A6NKX4 558 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 DPM1O60762 260 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 HPXP02790 462 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 ANKRD34CP0C6C1 535 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 TMEM69Q5SWH9 247 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 NAXEQ8NCW5 288 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 OR4C3Q8NH37 302 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 WDR89Q96FK6 387 aaPredicted RBP12.3□□□□□ -0.44
USP42-203ENST00000426246 TAS2R10Q9NYW0 307 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 DAPP1Q9UN19 280 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 CYP8B1Q9UNU6 501 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 DTX4Q9Y2E6 619 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 AP1M2Q9Y6Q5 423 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 URADA6NGE7 173 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 CENPBD1B2RD01 187 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 RPS5P46782 204 aaKnown RBP12.3□□□□□ -0.44
USP42-203ENST00000426246 TMEM201Q5SNT2 666 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 TTLL10Q6ZVT0 673 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 FAM219AQ8IW50 185 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 ZNF619Q8N2I2 560 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 OR11H7Q8NGC8 314 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 OR11H4Q8NGC9 324 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 OR52I2Q8NH67 350 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 PPP1R14AQ96A00 147 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 MNTQ99583 582 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 C1QTNF7Q9BXJ2 289 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 SCML1Q9UN30 329 aa12.3□□□□□ -0.44
USP42-203ENST00000426246 ADAM11O75078 769 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 APBB3O95704 486 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 ZNF10P21506 573 aaPredicted RBP12.29□□□□□ -0.44
USP42-203ENST00000426246 DCTDP32321 178 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 OR1D4P47884 311 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 KIAA1024LP59773 190 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 NKPD1Q17RQ9 610 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 C4orf46Q504U0 113 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 CCDC157Q569K6 752 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 EOGTQ5NDL2 527 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 HBMQ6B0K9 141 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 LIN54Q6MZP7 749 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 GID4Q8IVV7 300 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 TRIM2Q9C040 744 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 MKKSQ9NPJ1 570 aaPredicted RBP12.29□□□□□ -0.44
USP42-203ENST00000426246 TRAPPC4Q9Y296 219 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 GLULP15104 373 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
USP42-203ENST00000426246 ARL4DP49703 201 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 TNFRSF17Q02223 184 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 EIPR1Q53HC9 387 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 Q6ZSR6 202 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 ABHD13Q7L211 337 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 DPY19L4Q7Z388 723 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 OR2T4Q8NH00 348 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 ZNRF4Q8WWF5 429 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 ASB12Q8WXK4 309 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 ADOQ96SZ5 270 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 ZFYVE21Q9BQ24 234 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 B3GNT4Q9C0J1 378 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 SLA2Q9H6Q3 261 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 UBE2ZQ9H832 354 aaPredicted RBP12.29□□□□□ -0.44
USP42-203ENST00000426246 CENPMQ9NSP4 180 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 KIF26BQ2KJY2 2108 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 DCDC2BA2VCK2 349 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 TRABD2BA6NFA1 517 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 LGALS8O00214 317 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 CTXN1P60606 82 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 DECR1Q16698 335 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 FAM209AQ5JX71 171 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 OR10K2Q6IF99 312 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 LRRC28Q86X40 367 aaPredicted RBP12.29□□□□□ -0.44
USP42-203ENST00000426246 CAMKVQ8NCB2 501 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 MOSPD2Q8NHP6 518 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 ZDHHC1Q8WTX9 485 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 DNAJA4Q8WW22 397 aaPredicted RBP12.29□□□□□ -0.44
USP42-203ENST00000426246 PHF7Q9BWX1 381 aaPredicted RBP12.29□□□□□ -0.44
USP42-203ENST00000426246 SLC7A5P2Q9GIP4 190 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 FAM60AQ9NP50 221 aa12.29□□□□□ -0.44
USP42-203ENST00000426246 POLMQ9NP87 494 aaPredicted RBP12.29□□□□□ -0.44
USP42-203ENST00000426246 FGF20Q9NP95 211 aaPredicted RBP12.29□□□□□ -0.44
USP42-203ENST00000426246 M0R233 179 aa12.28□□□□□ -0.44
USP42-203ENST00000426246 SCO2O43819 266 aa12.28□□□□□ -0.44
USP42-203ENST00000426246 TMIGD3P0DMS9 266 aaPredicted RBP12.28□□□□□ -0.44
USP42-203ENST00000426246 GABRG2P18507 467 aa12.28□□□□□ -0.44
USP42-203ENST00000426246 PTH2RP49190 550 aa12.28□□□□□ -0.44
USP42-203ENST00000426246 PSMA6P60900 246 aaKnown RBP12.28□□□□□ -0.44
USP42-203ENST00000426246 YIF1BQ5BJH7 314 aa12.28□□□□□ -0.44
USP42-203ENST00000426246 C1orf189Q5VU69 101 aa12.28□□□□□ -0.44
USP42-203ENST00000426246 FAM220AQ7Z4H9 259 aa12.28□□□□□ -0.44
USP42-203ENST00000426246 SLC38A6Q8IZM9 456 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms