RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 YWHAGP61981 247 aaKnown RBP eCLIP2.54□□□□□ -2
LINC01040-201ENST00000425048 IFITM3Q01628 133 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 OTUD4Q01804 1114 aaKnown RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 SCRN3Q0VDG4 424 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 GK3PQ14409 553 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 TWISTNBQ3B726 338 aaPredicted RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 ZBED5Q49AG3 693 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 AARDQ4LEZ3 155 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 YIF1BQ5BJH7 314 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 Q5BKY6 102 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 TMEM182Q6ZP80 229 aaPredicted RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 FRA10AC1Q70Z53 315 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 CATSPER4Q7RTX7 472 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 WDR49Q8IV35 697 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 KLHL7Q8IXQ5 586 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 C12orf56Q8IXR9 622 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 TBC1D21Q8IYX1 336 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 OR52H1Q8NGJ2 320 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 OR8K3Q8NH51 312 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 LRRC20Q8TCA0 184 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 KRT35Q92764 455 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 RAD51AP1Q96B01 352 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 PDXPQ96GD0 296 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 DCUN1D1Q96GG9 259 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 ZNF560Q96MR9 790 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 TGS1Q96RS0 853 aaKnown RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 CYTH2Q99418 400 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 C19orf43Q9BQ61 176 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 SEC22CQ9BRL7 303 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 MLPHQ9BV36 600 aaPredicted RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 NTMT1Q9BV86 223 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 ROPN1BQ9BZX4 212 aaPredicted RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 TRIM9Q9C026 710 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 ELOVL4Q9GZR5 314 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 GOLPH3Q9H4A6 298 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 DHX33Q9H6R0 707 aaKnown RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 SMYD3Q9H7B4 428 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 NHEJ1Q9H9Q4 299 aaPredicted RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 ROPN1Q9HAT0 212 aaPredicted RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 ADGRL4Q9HBW9 690 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 DIABLOQ9NR28 239 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 POLE3Q9NRF9 147 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 COA4Q9NYJ1 87 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 ENPP5Q9UJA9 477 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 RNF11Q9Y3C5 154 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 OR1A2Q9Y585 309 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 AP4B1Q9Y6B7 739 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 BAZ2AQ9UIF9 1905 aaKnown RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 RGPD1P0DJD0 1748 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 MROH2AA6NES4 1674 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 LRRC37A3O60309 1634 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 LRP5O75197 1615 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 NRKQ7Z2Y5 1582 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 CPS1P31327 1500 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 TULP4Q9NRJ4 1543 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 PXDNLA1KZ92 1463 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 DISP2A7MBM2 1401 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 SF3B1O75533 1304 aaKnown RBP eCLIP2.53□□□□□ -2
LINC01040-201ENST00000425048 ADGRA3Q8IWK6 1321 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ATP6AP2A0A1C7CYW4 349 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 HEATR9A2RTY3 570 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 LINC00862A6NCI5 91 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 A8MUA0 341 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 MEI4A8MW99 385 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 FAM86B1E9PN63 330 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 RASGRF2O14827 1237 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 GYG2O15488 501 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 RIPK2O43353 540 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ZBTB14O43829 449 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 SSX5O60225 188 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 NIPSNAP2O75323 286 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ZNF324O75467 553 aaPredicted RBP2.53□□□□□ -2
LINC01040-201ENST00000425048 TM7SF2O76062 418 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 CIAO1O76071 339 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 KCNK2O95069 426 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 SLC2A10O95528 541 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ASS1P00966 412 aaKnown RBP2.53□□□□□ -2
LINC01040-201ENST00000425048 UGT2B4P06133 528 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 GLAP06280 429 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ADRB2P07550 413 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 HEXBP07686 556 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 PLEKP08567 350 aaPredicted RBP2.53□□□□□ -2
LINC01040-201ENST00000425048 KRT7P08729 469 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 HBQ1P09105 142 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 FAM86B2P0C5J1 330 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 HOXB8P17481 243 aaPredicted RBP2.53□□□□□ -2
LINC01040-201ENST00000425048 IL11P20809 199 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 IDSP22304 550 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 PBLDP30039 288 aaPredicted RBP2.53□□□□□ -2
LINC01040-201ENST00000425048 UGT2B10P36537 528 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ERFP50548 548 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 CDKL1Q00532 357 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 IL1RL1Q01638 556 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 GNA12Q03113 381 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 SPAG1Q07617 926 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 BAMBIQ13145 260 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 STX3Q13277 289 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 PLD1Q13393 1074 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 ZNF846Q147U1 533 aa2.53□□□□□ -2
LINC01040-201ENST00000425048 PON2Q15165 354 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms