RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PCSK9Q8NBP7 692 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 BRIX1Q8TDN6 353 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 SLC35G5Q96KT7 338 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 GFI1Q99684 422 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 OR52D1Q9H346 318 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 ZMAT3Q9HA38 289 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 AKAP7Q9P0M2 348 aaPredicted RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 GNG8Q9UK08 70 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 ZNF346Q9UL40 294 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 TRBV2A0A0J9YWF9 115 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 NPC1O15118 1278 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 PLPP2O43688 288 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 UGDHO60701 494 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 RPP14O95059 124 aaKnown RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 OAZ2O95190 189 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 CATP04040 527 aaKnown RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 FBXO45P0C2W1 286 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 CCDC157Q569K6 752 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 RTP2Q5QGT7 225 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 CD300LDQ6UXZ3 194 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 MEPCEQ7L2J0 689 aaKnown RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 HSD11B1LQ7Z5J1 315 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 OR4C16Q8NGL9 310 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 TM4SF18Q96CE8 201 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 VRK1Q99986 396 aaPredicted RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 RIOK2Q9BVS4 552 aaKnown RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 USP36Q9P275 1121 aaKnown RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 ASH2LQ9UBL3 628 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 PLEKHA6Q9Y2H5 1048 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 ZNF337Q9Y3M9 751 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 CENPVL1A0A0U1RR11 272 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 CARNS1A5YM72 827 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 SC5DO75845 299 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 IGSF6O95976 241 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 DAOP14920 347 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 NDUFV2P19404 249 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 CD70P32970 193 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 NCBP2P52298 156 aaKnown RBP eCLIP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 FXYD6P3P58550 94 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 RELQ04864 619 aaPredicted RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 HABP2Q14520 560 aaPredicted RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 FAM69AQ5T7M9 428 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 LYPLAL1Q5VWZ2 237 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 ZNF620Q6ZNG0 422 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 RASGEF1AQ8N9B8 481 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 NR4A3Q92570 626 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 NAA11Q9BSU3 229 aaPredicted RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 ZCCHC2Q9C0B9 1178 aaKnown RBP10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 DYRK1BQ9Y463 629 aa10.4□□□□□ -0.74
SEC61A1-202ENST00000424880 A0A1B0GV90 55 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 CPED1A4D0V7 1026 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 F5H0A9 414 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 TBX6O95947 436 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 C1GALT1C1LP0DN25 315 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 NQO2P16083 231 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 SERPINA4P29622 427 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 RGS8P57771 180 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 PPIAP62937 165 aaKnown RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 DUSP2Q05923 314 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 ECH1Q13011 328 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 CRMP1Q14194 572 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 GLT8D1Q68CQ7 371 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 FUT10Q6P4F1 479 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 FIGNL1Q6PIW4 674 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 UQCC3Q6UW78 93 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 TPRG1Q6ZUI0 275 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 PXKQ7Z7A4 578 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 TPRA1Q86W33 373 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 BEST3Q8N1M1 668 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 OR6K3Q8NGY3 331 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 RGP1Q92546 391 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 OSTF1Q92882 214 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 KISS1RQ969F8 398 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 GLIPR2Q9H4G4 154 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 EXO5Q9H790 373 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 MRPL17Q9NRX2 175 aaKnown RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 PLXNB3Q9ULL4 1909 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 A0A1B0GTH9 108 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 METTL21EPA6NDL7 271 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF729A6NN14 1252 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 J3QRE1 110 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 NDUFB6O95139 128 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 SAGP10523 405 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 MAPK3P27361 379 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 ITPKBP27987 946 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 AQP2P41181 271 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 SPINT3P49223 89 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 OR2B8PP59922 312 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 NCMAPQ5T1S8 102 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 TMEM220Q6QAJ8 160 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 SLC29A4Q7RTT9 530 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 ADCK2Q7Z695 626 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 DMRTC2Q8IXT2 367 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 LRRC56Q8IYG6 542 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 C14orf79Q96F83 325 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 MCHR1Q99705 422 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 C20orf24Q9BUV8 137 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 C6orf106Q9H6K1 298 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 C8orf33Q9H7E9 229 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF629Q9UEG4 869 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms