RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 IGLV1-44P01699 117 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 MELTFP08582 738 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 CTAGE8P0CG41 777 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 CD79AP11912 226 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 BCKDHAP12694 445 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 STMN1P16949 149 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 VAMP1P23763 118 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 NTF4P34130 210 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 SERPINB4P48594 390 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 TRA2BP62995 288 aaKnown RBP5.34□□□□□ -1.55
SDCBP-203ENST00000424270 PDE7AQ13946 482 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 TRADDQ15628 312 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 PFKFB4Q16877 469 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 CCNJQ5T5M9 372 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 RNASEH2BQ5TBB1 312 aaKnown RBP5.34□□□□□ -1.55
SDCBP-203ENST00000424270 LRRN1Q6UXK5 716 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 Q6ZSV7 163 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 RNF144BQ7Z419 303 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 GOLGA7Q7Z5G4 137 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 MTERF4Q7Z6M4 381 aaKnown RBP5.34□□□□□ -1.55
SDCBP-203ENST00000424270 MDP1Q86V88 176 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 MYPOPQ86VE0 399 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-203ENST00000424270 ZC3HC1Q86WB0 502 aaKnown RBP5.34□□□□□ -1.55
SDCBP-203ENST00000424270 CTAGE4Q8IX94 777 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 CCDC170Q8IYT3 715 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 AGGF1Q8N302 714 aaeCLIP5.34□□□□□ -1.55
SDCBP-203ENST00000424270 SPICQ8N5J4 248 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 Q8NFD4 153 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 OR4F17Q8NGA8 305 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 OR6Y1Q8NGX8 325 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 KIF18AQ8NI77 898 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 ZNF563Q8TA94 476 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 GPR119Q8TDV5 335 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 TMEM234Q8WY98 164 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 DPF1Q92782 380 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 ZG16BQ96DA0 208 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 OTUB1Q96FW1 271 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-203ENST00000424270 OR4F4Q96R69 305 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 PRDM13Q9H4Q3 707 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 DENND2DQ9H6A0 471 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-203ENST00000424270 NPHS2Q9NP85 383 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 LMBRD1Q9NUN5 540 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 CRNNQ9UBG3 495 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-203ENST00000424270 RNF14Q9UBS8 474 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 FLVCR1Q9Y5Y0 555 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 A0A1W2PQD3 144 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 GOLGA6L22H0YM25 854 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 OIP5O43482 229 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 TRAF3IP2O43734 574 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 EIF1BO60739 113 aaKnown RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 KCNK2O95069 426 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 PMS2P2O95744 297 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 IGKV3-15P01624 115 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 IGHV4-59P01825 116 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 FGGP02679 453 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 UBL4AP11441 157 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 PRPS2P11908 318 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 LMO1P25800 156 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 GABRA5P31644 462 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 MSX2P35548 267 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 GLRXP35754 106 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 MAGEA6P43360 314 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 PTDSS1P48651 473 aaKnown RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 SLC16A1P53985 500 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 KLF3P57682 345 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 SLC35A1P78382 337 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 GLO1Q04760 184 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 MGAT5Q09328 741 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 HSPB3Q12988 150 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 ZFAND6Q6FIF0 208 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 RGS7BPQ6MZT1 257 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 NOXRED1Q6NXP6 359 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 TRMT10BQ6PF06 316 aaKnown RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 DRICH1Q6PGQ1 229 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 ZAR1Q86SH2 424 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 PPIL6Q8IXY8 311 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 OR2L13Q8N349 312 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 CDRT4Q8N9R6 151 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 SCCPDHQ8NBX0 429 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 CPEB3Q8NE35 698 aaKnown RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 OR5W2Q8NH69 310 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 UBTD2Q8WUN7 234 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 SELENOMQ8WWX9 145 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 BCL2L2Q92843 193 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 NEURL3Q96EH8 262 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 HES6Q96HZ4 224 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF317Q96PQ6 595 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 THUMPD3Q9BV44 507 aaKnown RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 EGLN1Q9GZT9 426 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 IQCGQ9H095 443 aaKnown RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 OR51B6Q9H340 312 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 DPAGT1Q9H3H5 408 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 SERHL2Q9H4I8 314 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 NOL11Q9H8H0 719 aaKnown RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 CNTD2Q9H8S5 307 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 CPSF2Q9P2I0 782 aaKnown RBP5.33□□□□□ -1.56
SDCBP-203ENST00000424270 EGFL7Q9UHF1 273 aa5.33□□□□□ -1.56
SDCBP-203ENST00000424270 IL20RAQ9UHF4 553 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms