RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 KIF2BQ8N4N8 673 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF781Q8N8C0 355 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF615Q8N8J6 731 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 TMEM178AQ8NBL3 297 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 MDS2Q8NDY4 140 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 C17orf47Q8NEP4 570 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SLC22A8Q8TCC7 542 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 MGARPQ8TDB4 240 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF75CPQ92670 426 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 EXOSC8Q96B26 276 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 OTULINQ96BN8 352 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PPCDCQ96CD2 204 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 TUBGCP3Q96CW5 907 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SNRNP40Q96DI7 357 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CNRIP1Q96F85 164 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SCMH1Q96GD3 660 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 EGLN2Q96KS0 407 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 EBPLQ9BY08 206 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 C20orf27Q9GZN8 174 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 AGPAT4Q9NRZ5 378 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SLC6A13Q9NSD5 602 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ACSS1Q9NUB1 689 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 MAT2BQ9NZL9 334 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 OR6C3Q9NZP0 311 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PRODH2Q9UF12 536 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ATP6V1HQ9UI12 483 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 EXO1Q9UQ84 846 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ERVK-19Q9WJR5 959 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ENTPD4Q9Y227 616 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 KLF13Q9Y2Y9 288 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 FAM96BQ9Y3D0 163 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 POLR3HQ9Y535 204 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 A3GALT2U3KPV4 340 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CCDC88CQ9P219 2028 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 C2orf92A0A1B0GVN3 265 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ATP6AP2A0A1C7CYW4 349 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 hDV102S1A0JD36 115 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 A8MZ25 164 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 WWP2O00308 870 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 AP3D1O14617 1153 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 HDAC3O15379 428 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PRKNO60260 465 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ATP6AP2O75787 350 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SERPINI2O75830 405 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 OR2J2O76002 312 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CH25HO95992 272 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CLPSP04118 112 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CT62P0C5K7 136 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SDC1P18827 310 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PRPS1L1P21108 318 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CNR1P21554 472 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SSTR2P30874 369 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 NTSP30990 170 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PPICP45877 212 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 MLLT10P55197 1068 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CLDN8P56748 225 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 RIPPLY3P57055 190 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 RPP38P78345 283 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PDE7AQ13946 482 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 EBPQ15125 230 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF791Q3KP31 576 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 MMEL1Q495T6 779 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 KLHL22Q53GT1 634 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 KRTCAP3Q53RY4 240 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 TTMPQ5BVD1 217 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF628Q5EBL2 1059 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 FHL5Q5TD97 284 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SLC22A10Q63ZE4 541 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SPINK14Q6IE38 97 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PRSS57Q6UWY2 283 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 RTL4Q6ZR62 310 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CREB3L2Q70SY1 520 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SPATA19Q7Z5L4 167 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PATL1Q86TB9 770 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 NR2C2APQ86WQ0 139 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 C9orf40Q8IXQ3 194 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 LIX1Q8N485 282 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ARFGAP2Q8N6H7 521 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 BCORP1Q8N888 145 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF321PQ8N8H1 164 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF441Q8N8Z8 693 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 FNDC5Q8NAU1 212 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 POGLUT1Q8NBL1 392 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CDC26Q8NHZ8 85 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 AGR3Q8TD06 166 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ADIPOR1Q96A54 375 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 FAM120BQ96EK7 910 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 C19orf60Q96EN9 201 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ZBED6CLQ96FA7 236 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 C3orf30Q96M34 536 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 TSSK3Q96PN8 268 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 RASL10BQ96S79 203 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SECISBP2Q96T21 854 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 NUDT16L1Q9BRJ7 211 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 WWTR1Q9GZV5 400 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 MEAF6Q9HAF1 191 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 NOX4Q9NPH5 578 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 INTS9Q9NV88 658 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ATAD3AQ9NVI7 634 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ASF1BQ9NVP2 202 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms