RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 SPATA9Q9BWV2 254 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 SRXN1Q9BYN0 137 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 KLHL4Q9C0H6 718 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 GCM1Q9NP62 436 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 RASSF1Q9NS23 344 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 FGFR1OP2Q9NVK5 253 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 RLIMQ9NVW2 624 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 VAPAQ9P0L0 249 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 KLHL9Q9P2J3 617 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 ZNF443Q9Y2A4 671 aaPredicted RBP6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 TMED7Q9Y3B3 224 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 HDGFL3Q9Y3E1 203 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 GMEB1Q9Y692 573 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 KIAA1549Q9HCM3 1950 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 DSPPQ9NZW4 1301 aa6.74□□□□□ -1.33
AC012560.1-202ENST00000421324 TRBV5-3A0A0A0MS03 114 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 IGHV3-15A0A0B4J1V0 119 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 PRORSD1PA6NEY8 169 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 AP3D1O14617 1153 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 ZNF208O43345 1280 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 DNPH1O43598 174 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 SERPINB7O75635 380 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 GOSR1O95249 250 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 GKN3PP0CG01 181 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 ETS2P15036 469 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 HOXB9P17482 250 aaPredicted RBP6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 UGT2B10P36537 528 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 MDH1P40925 334 aaKnown RBP6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 OR2B6P58173 313 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 RASGEF1BQ0VAM2 473 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 SF3A3Q12874 501 aaKnown RBP eCLIP6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 CYLC2Q14093 348 aaPredicted RBP6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 MAPRE2Q15555 327 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 KRTAP19-4Q3LI73 84 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 MMEL1Q495T6 779 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 RNF220Q5VTB9 566 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 WBP2NLQ6ICG8 309 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 DLEU7Q6UYE1 221 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 ZNF836Q6ZNA1 936 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 DHDDSQ86SQ9 333 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 TUSC5Q8IXB3 177 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 CLIP4Q8N3C7 705 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 CADM2Q8N3J6 435 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 DPP10Q8N608 796 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 NFKBIDQ8NI38 313 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 SLC35B4Q969S0 331 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 ANKRD27Q96NW4 1050 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 WFIKKN1Q96NZ8 548 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 CGREF1Q99674 301 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 SH3GL1Q99961 368 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 GPATCH1Q9BRR8 931 aaKnown RBP6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 NAA11Q9BSU3 229 aaPredicted RBP6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 MED18Q9BUE0 208 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 CDADC1Q9BWV3 514 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 HDHD5Q9BXW7 423 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 ZNF385DQ9H6B1 395 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 CCDC134Q9H6E4 229 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 TMEM38AQ9H6F2 299 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 COQ10BQ9H8M1 238 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 KLHL28Q9NXS3 571 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 ZNF226Q9NYT6 803 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 TMEM181Q9P2C4 612 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 KLHL13Q9P2N7 655 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 RPS6KB2Q9UBS0 482 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 OSGIN1Q9UJX0 560 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 SLC13A4Q9UKG4 626 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 ITGB1BP2Q9UKP3 347 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 TRAPPC4Q9Y296 219 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 CREBBPQ92793 2442 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 CENPEQ02224 2701 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 MED12LQ86YW9 2145 aa6.73□□□□□ -1.33
AC012560.1-202ENST00000421324 LOC100653049A0A140TA62 436 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 ZNF724A8MTY0 619 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 GPR171O14626 319 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 EIF1BO60739 113 aaKnown RBP6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 CYTIPO60759 359 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 KRT34O76011 436 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 PMS2P2O95744 297 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 NPPAP01160 153 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 FESP07332 822 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 CD1EP15812 388 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 PPP3CBP16298 524 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 AGTR1P30556 359 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 ADSLP30566 484 aaPredicted RBP6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 PRKAR1BP31321 381 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 ACAA2P42765 397 aaKnown RBP6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 ERVFRD-1P60508 538 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 SLC35A1P78382 337 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 RBBP4Q09028 425 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 KLF10Q13118 480 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 SCARB2Q14108 478 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 CYP51A1Q16850 503 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 NUFIP2Q7Z417 695 aaKnown RBP6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 SLC30A8Q8IWU4 369 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 ZNF100Q8IYN0 542 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 C11orf65Q8NCR3 313 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 HIPK4Q8NE63 616 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 PIGXQ8TBF5 258 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 ARL5BQ96KC2 179 aa6.72□□□□□ -1.33
AC012560.1-202ENST00000421324 POTEKPQ9BYX7 375 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms