RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 TECTAO75443 2155 aa8.02□□□□□ -1.12
SNCA-206ENST00000420646 AHCTF1Q8WYP5 2266 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 TEX51A0A1B0GUA7 166 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 C11orf98E9PRG8 122 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 AKAP8O43823 692 aaKnown RBP8.02□□□□□ -1.13
SNCA-206ENST00000420646 HPGDSO60760 199 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 NDUFB2O95178 105 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 OPN1LWP04000 364 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 SLC6A6P31641 620 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNCA-206ENST00000420646 PLCXD2Q0VAA5 305 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 CBX3Q13185 183 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 ELAVL1Q15717 326 aaKnown RBP8.02□□□□□ -1.13
SNCA-206ENST00000420646 HLA-DQA1Q5Y7H0 255 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 TMPRSS11AQ6ZMR5 421 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 GDPD3Q7L5L3 318 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 ZNF554Q86TJ5 538 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 GID4Q8IVV7 300 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 CELF2-AS1Q8N7Q2 184 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 OR5W2Q8NH69 310 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 TAAR8Q969N4 342 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 OMA1Q96E52 524 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 DIRAS2Q96HU8 199 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 NEDD4LQ96PU5 975 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 OR11A1Q9GZK7 315 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 WWTR1Q9GZV5 400 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 PCED1AQ9H1Q7 454 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 GALNT9Q9HCQ5 603 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 NANSQ9NR45 359 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 OCIAD1Q9NX40 245 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 CLEC4AQ9UMR7 237 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 COPS3Q9UNS2 423 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 TP53BP1Q12888 1972 aaPredicted RBP8.02□□□□□ -1.13
SNCA-206ENST00000420646 EFCAB7A8K855 629 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 PRR32B1ATL7 298 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 SHISA8B8ZZ34 492 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 MASP2O00187 686 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 NDUFB5O43674 189 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 CBFA2T3O75081 653 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 EPHA8P29322 1005 aaPredicted RBP8.02□□□□□ -1.13
SNCA-206ENST00000420646 PSPHP78330 225 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 GPLD1P80108 840 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 KIF26BQ2KJY2 2108 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 PHF19Q5T6S3 580 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 ATG4DQ86TL0 474 aaPredicted RBP8.02□□□□□ -1.13
SNCA-206ENST00000420646 NPEPL1Q8NDH3 523 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 ADAMTS18Q8TE60 1221 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 SAP25Q8TEE9 199 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 OR1F2PQ96R84 312 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 PDCD1LG2Q9BQ51 273 aa8.02□□□□□ -1.13
SNCA-206ENST00000420646 A0A0B4J203 849 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 IGHV5-10-1A0A0J9YXX1 117 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 ANKRD61A6NGH8 418 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 TVP23AA6NH52 213 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 SLC22A31A6NKX4 558 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 RNF13O43567 381 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 DYRK3O43781 588 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 GPR143P51810 404 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 FBXW4P57775 412 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 ZNF45Q02386 682 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 GALEQ14376 348 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 P2RY14Q15391 338 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 INPP5JQ15735 1006 aaPredicted RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 NIPAL1Q6NVV3 410 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 LEG1Q6P5S2 330 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 FAM131AQ6UXB0 335 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 GDPGP1Q6ZNW5 385 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 OR7G1Q8NGA0 311 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 OR1N1Q8NGS0 311 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 DNAJA4Q8WW22 397 aaPredicted RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 PMM1Q92871 262 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 LPAR4Q99677 370 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 TBL1XR1Q9BZK7 514 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 ERVMER34-1Q9H9K5 563 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 HRH3Q9Y5N1 445 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 MN1Q10571 1320 aaPredicted RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 URB1O60287 2271 aaKnown RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 TAF4O00268 1085 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 SCRG1O75711 98 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 PAHP00439 452 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 ZNF24P17028 368 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 AHCYP23526 432 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 APEX1P27695 318 aaKnown RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 RBM34P42696 430 aaKnown RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 CTXN1P60606 82 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 ZNF74Q16587 644 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 NKAIN1Q4KMZ8 207 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 CCDC157Q569K6 752 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 WBP2NLQ6ICG8 309 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 TMEM71Q6P5X7 295 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 WDR74Q6RFH5 385 aaPredicted RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 LINC00299Q6ZSB3 139 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 ZNF527Q8NB42 609 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 HSD17B8Q92506 261 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 SLC35B4Q969S0 331 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 ZNF578Q96N58 590 aaPredicted RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 GTPBP2Q9BX10 602 aaKnown RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 RNF32Q9H0A6 362 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 ZNF768Q9H5H4 540 aaKnown RBP8.01□□□□□ -1.13
SNCA-206ENST00000420646 ACOXLQ9NUZ1 547 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms