RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 TMEM229AB2RXF0 380 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 CRYAAP02489 173 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 CELA3BP08861 270 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 APEX1P27695 318 aaKnown RBP12.32□□□□□ -0.44
NFE4-201ENST00000420058 THBS4P35443 961 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 SRP14P37108 136 aaKnown RBP12.32□□□□□ -0.44
NFE4-201ENST00000420058 SLC1A3P43003 542 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 HTR3AP46098 478 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 COMPP49747 757 aaPredicted RBP12.32□□□□□ -0.44
NFE4-201ENST00000420058 SELENOPP49908 381 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 POLR2HP52434 150 aaKnown RBP12.32□□□□□ -0.44
NFE4-201ENST00000420058 CHN2P52757 468 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 CEACAM7Q14002 265 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 C3orf36Q3SXR2 165 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 OTUD3Q5T2D3 398 aaPredicted RBP12.32□□□□□ -0.44
NFE4-201ENST00000420058 SAXO2Q658L1 398 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 VHLLQ6RSH7 139 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 DEF8Q6ZN54 512 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 ZCCHC23Q6ZST2 131 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 EPHX4Q8IUS5 362 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 IFT20Q8IY31 132 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 FAM169BQ8N8A8 192 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 MNS1Q8NEH6 495 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 NUP37Q8NFH4 326 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 OR8J2Q8NGG1 315 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 DDIT4LQ96D03 193 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 C16orf45Q96MC5 204 aaPredicted RBP12.32□□□□□ -0.44
NFE4-201ENST00000420058 SNX18Q96RF0 628 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 RAB1BQ9H0U4 201 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 PIF1Q9H611 641 aa12.32□□□□□ -0.44
NFE4-201ENST00000420058 ZNF503-AS2A6NEH8 195 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 AQP7P3A6NL99 342 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 FAAHO00519 579 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 UPK3AO75631 287 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 IGKV3-15P01624 115 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 DVL1P1P54792 670 aaPredicted RBP12.31□□□□□ -0.44
NFE4-201ENST00000420058 EMX2Q04743 252 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 MSMPQ1L6U9 139 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 KLHL24Q6TFL4 600 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 CREB3L2Q70SY1 520 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 ANKRD46Q86W74 232 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 HOMEZQ8IX15 550 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 GSPT2Q8IYD1 628 aaKnown RBP12.31□□□□□ -0.44
NFE4-201ENST00000420058 SVOPLQ8N434 492 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 ANKFN1Q8N957 763 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 MAGEE2Q8TD90 523 aaPredicted RBP12.31□□□□□ -0.44
NFE4-201ENST00000420058 EPS8L3Q8TE67 593 aaKnown RBP12.31□□□□□ -0.44
NFE4-201ENST00000420058 ZFAND2BQ8WV99 257 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 NEU4Q8WWR8 484 aaPredicted RBP12.31□□□□□ -0.44
NFE4-201ENST00000420058 NEURL3Q96EH8 262 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 SLC38A1Q9H2H9 487 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 ZNF442Q9H7R0 627 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 ASIC5Q9NY37 505 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 SLC17A7Q9P2U7 560 aa12.31□□□□□ -0.44
NFE4-201ENST00000420058 A0A096LPE4 126 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 A0A0A6YYJ9 748 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 A0A1W2PPZ6 126 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 AGAP5A6NIR3 686 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 SMIM23A6NLE4 172 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 SLCO1B7G3V0H7 640 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 hCG_2039718K7EN88 272 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 HMGN4O00479 90 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 SKAP2O75563 359 aaPredicted RBP12.3□□□□□ -0.44
NFE4-201ENST00000420058 AGR2O95994 175 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 CHRM4P08173 479 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 RPS4Y1P22090 263 aaKnown RBP12.3□□□□□ -0.44
NFE4-201ENST00000420058 UQCRC2P22695 453 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 MAP2K6P52564 334 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 EPS8Q12929 822 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 OR7A5Q15622 319 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 MAPK11Q15759 364 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 SYPL1Q16563 259 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 ATAD3BQ5T9A4 648 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 CARM1Q86X55 608 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 OR4F15Q8NGB8 312 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 OR4A15Q8NGL6 344 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 UBASH3BQ8TF42 649 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 TUBGCP3Q96CW5 907 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 MKS1Q9NXB0 559 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 MID2Q9UJV3 735 aa12.3□□□□□ -0.44
NFE4-201ENST00000420058 IGHV2OR16-5A0A0B4J2B6 119 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 PRSS51A0A1B0GVH4 220 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 ZNF432O94892 652 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 CPSF4O95639 269 aaKnown RBP12.29□□□□□ -0.44
NFE4-201ENST00000420058 GPIP06744 558 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 CBR1P16152 277 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 NPR2P20594 1047 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 ACAA2P42765 397 aaKnown RBP12.29□□□□□ -0.44
NFE4-201ENST00000420058 KHKP50053 298 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 BNIP2Q12982 314 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 CASP8Q14790 479 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 RINLQ6ZS11 566 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 CMIPQ8IY22 773 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 CDK20Q8IZL9 346 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 ZNF837Q96EG3 531 aaPredicted RBP12.29□□□□□ -0.44
NFE4-201ENST00000420058 ALKBH3Q96Q83 286 aaPredicted RBP12.29□□□□□ -0.44
NFE4-201ENST00000420058 METTL17Q9H7H0 456 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms