RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 FAM168AQ92567 244 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 PARD6BQ9BYG5 372 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 WDR55Q9H6Y2 383 aaPredicted RBP15.14■□□□□ 0.01
PTCD1-202ENST00000419981 RLIMQ9NVW2 624 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 DSPPQ9NZW4 1301 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 COL6A5A8TX70 2615 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 CUBNO60494 3623 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 AQP7P3A6NL99 342 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 ELOA3DA6NLF2 546 aaPredicted RBP15.13■□□□□ 0.01
PTCD1-202ENST00000419981 IL6P05231 212 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 BCHEP06276 602 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 KITP10721 976 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 SLC25A16P16260 332 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 APOBEC3AP31941 199 aaPredicted RBP15.13■□□□□ 0.01
PTCD1-202ENST00000419981 CRISP3P54108 245 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 COPZ1P61923 177 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 CHRNB3Q05901 458 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 LOXL1Q08397 574 aaPredicted RBP15.13■□□□□ 0.01
PTCD1-202ENST00000419981 MAPK11Q15759 364 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 TMEM249Q2WGJ8 235 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 ELOA3BQ3SY89 546 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 C6orf52Q5T4I8 152 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 WBP2NLQ6ICG8 309 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 CROCCP2Q86T23 111 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 CADM2Q8N3J6 435 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 ELOA3Q8NG57 546 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 ZBTB9Q96C00 473 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 ZNF385AQ96PM9 386 aaKnown RBP15.13■□□□□ 0.01
PTCD1-202ENST00000419981 TNFRSF13CQ96RJ3 184 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 TAPBPLQ9BX59 468 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 PIF1Q9H611 641 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 THAP1Q9NVV9 213 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 PRDM4Q9UKN5 801 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 PMF1-BGLAPU3KQ54 211 aa15.13■□□□□ 0.01
PTCD1-202ENST00000419981 ATRQ13535 2644 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 A8MVM7 634 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 ATP6V1G2-DDX39BF2Z307 99 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 KRT33AO76009 404 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 ANP32DO95626 131 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 CSF3P09919 207 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 ETFAP13804 333 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 IDO1P14902 403 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 CDH2P19022 906 aaPredicted RBP15.12■□□□□ 0.01
PTCD1-202ENST00000419981 ACAA2P42765 397 aaKnown RBP15.12■□□□□ 0.01
PTCD1-202ENST00000419981 CRATP43155 626 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 MVDP53602 400 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 DSTNP60981 165 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 BNIP2Q12982 314 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 PDCD4Q53EL6 469 aaKnown RBP15.12■□□□□ 0.01
PTCD1-202ENST00000419981 RNF220Q5VTB9 566 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 NXNQ6DKJ4 435 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 TMEM225Q6GV28 225 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 ZIC4Q8N9L1 334 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 AURKBQ96GD4 344 aaPredicted RBP15.12■□□□□ 0.01
PTCD1-202ENST00000419981 REPIN1Q9BWE0 567 aaKnown RBP15.12■□□□□ 0.01
PTCD1-202ENST00000419981 MANSC1Q9H8J5 431 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 CACYBPQ9HB71 228 aaKnown RBP15.12■□□□□ 0.01
PTCD1-202ENST00000419981 SLC6A13Q9NSD5 602 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 ADPRHL2Q9NX46 363 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 ZNF443Q9Y2A4 671 aaPredicted RBP15.12■□□□□ 0.01
PTCD1-202ENST00000419981 MXRA5Q9NR99 2828 aa15.12■□□□□ 0.01
PTCD1-202ENST00000419981 SLCO1B7G3V0H7 640 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 FRS3O43559 492 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 SNNO75324 88 aaPredicted RBP15.11■□□□□ 0.01
PTCD1-202ENST00000419981 SLC22A3O75751 556 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 NCF2P19878 526 aaPredicted RBP15.11■□□□□ 0.01
PTCD1-202ENST00000419981 EFNA4P52798 201 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 VLDLRP98155 873 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 LARS2Q15031 903 aaKnown RBP15.11■□□□□ 0.01
PTCD1-202ENST00000419981 ZSWIM7Q19AV6 140 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 C10orf105Q8TEF2 133 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 TPT1P8Q9HAU6 139 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 OBP2BQ9NPH6 170 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 MOKQ9UQ07 419 aa15.11■□□□□ 0.01
PTCD1-202ENST00000419981 A0A096LPI6 279 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 TMEM120BA0PK00 339 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 TMEM247A6NEH6 219 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 RNF212BA8MTL3 300 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 ZNF587BE7ETH6 402 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 VAMP5O95183 116 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 ZCCHC18P0CG32 403 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 P2RY4P51582 365 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 WDR4P57081 412 aaKnown RBP15.1■□□□□ 0.01
PTCD1-202ENST00000419981 HIKESHIQ53FT3 197 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 RPS26P11Q5JNZ5 115 aaPredicted RBP15.1■□□□□ 0.01
PTCD1-202ENST00000419981 C1orf140Q5VVS0 124 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 PRAMEF8Q5VWM4 474 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 PRAMEF7Q5VXH5 474 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 ATG16L1Q676U5 607 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 MSANTD1Q6ZTZ1 278 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 MGARPQ8TDB4 240 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 SLC38A5Q8WUX1 472 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 TMEM19Q96HH6 336 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 BOD1Q96IK1 185 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 ALKBH3Q96Q83 286 aaPredicted RBP15.1■□□□□ 0.01
PTCD1-202ENST00000419981 KCNS3Q9BQ31 491 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 ARMC7Q9H6L4 198 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 RMND5AQ9H871 391 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 TMEM45AQ9NWC5 275 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 THUMPD1Q9NXG2 353 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms