RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PELI1Q96FA3 418 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM41AQ96HV5 264 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 CNTNAP3BQ96NU0 1288 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 ALX4Q9H161 411 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 NOX4Q9NPH5 578 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 OR5V1Q9UGF6 321 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PLEKHA6Q9Y2H5 1048 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 MDC1Q14676 2089 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 H7C417 338 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC25A4P12235 298 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC2A5P22732 501 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ABCD3P28288 659 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ANXA11P50995 505 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 CLDN12P56749 244 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 CXADRP78310 365 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ILF3Q12906 894 aaKnown RBP eCLIP7.38□□□□□ -1.235e-14■■■□□ 14.6
HMGXB4-202ENST00000418170 TP53I3Q53FA7 332 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 VRK2Q86Y07 508 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 OR2AP1Q8NGE2 309 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC2A12Q8TD20 617 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 DUSP19Q8WTR2 217 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ARL11Q969Q4 196 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 MIB2Q96AX9 1013 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC41A3Q96GZ6 507 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 C1orf198Q9H425 327 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 TCF7L1Q9HCS4 588 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 POT1Q9NUX5 634 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 MTFP1Q9UDX5 166 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF230Q9UIE0 474 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 PLXNA2O75051 1894 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 FAM86C2PA6NEL3 165 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 UNC119BA6NIH7 251 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 PIN1P1O15428 100 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 CTNSO60931 367 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 RBBP9O75884 186 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 CD1AP06126 327 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 CALCBP10092 127 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF44P15621 663 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 TEAD1P28347 426 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 PDHA2P29803 388 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 KHDRBS2Q5VWX1 349 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 C11orf87Q6NUJ2 197 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 RFLNBQ8N5W9 214 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ZSCAN1Q8NBB4 408 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 LINC01599Q8WXQ3 324 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SCAMP4Q969E2 229 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 GLIPR2Q9H4G4 154 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 CCDC86Q9H6F5 360 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 KRCC1Q9NPI7 259 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 HAO2Q9NYQ3 351 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 TAS2R8Q9NYW2 309 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF337Q9Y3M9 751 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 GLSO94925 669 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 RGS8P57771 180 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SIRPAP78324 504 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SRSF4Q08170 494 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 TEAD2Q15562 447 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ACER2Q5QJU3 275 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ACOT7LQ6ZUV0 252 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 GAREM2Q75VX8 874 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF433Q8N7K0 673 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 EDAQ92838 391 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ZG16BQ96DA0 208 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 TRMT2BQ96GJ1 504 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 AMDHD1Q96NU7 426 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 CHST6Q9GZX3 395 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC25A18Q9H1K4 315 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 IL21RQ9HBE5 538 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ACKR4Q9NPB9 350 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 UQCC1Q9NVA1 299 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 LRFN2Q9ULH4 789 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 V9GY05 133 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 TRBV2A0A0J9YWF9 115 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ACOD1A6NK06 481 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 CSF1P09603 554 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 GKN3PP0CG01 181 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 CLUP10909 449 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 BMP7P18075 431 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 PRKAG1P54619 331 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 ACTR1AP61163 376 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 FABP9Q0Z7S8 132 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 LASP1Q14847 261 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 PLEKHN1Q494U1 663 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 LRRC73Q5JTD7 316 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 RPL22L1Q6P5R6 122 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 RSPO2Q6UXX9 243 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SYS1Q8N2H4 156 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 OR4A4PQ8NGN8 299 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 TOX2Q96NM4 488 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 MCHR1Q99705 422 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 PDCD1LG2Q9BQ51 273 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SUV39H2Q9H5I1 410 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM100Q9NV29 134 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 SIDT1Q9NXL6 827 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 B4GALT6Q9UBX8 382 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 DMRT1Q9Y5R6 373 aa7.38□□□□□ -1.23
HMGXB4-202ENST00000418170 A0A1B0GTI1 187 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 OR2T1O43869 369 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 FADS1O60427 444 aa7.37□□□□□ -1.23
HMGXB4-202ENST00000418170 PMS2P2O95744 297 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms