RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 FAM221BA6H8Z2 402 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 KDM4EB2RXH2 506 aaPredicted RBP11.99□□□□□ -0.49
SCN1B-202ENST00000415950 PLPP1O14494 284 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 FCMRO60667 390 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 HHEXQ03014 270 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 TSPAN31Q12999 210 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 GBX1Q14549 363 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 BPIFB2Q8N4F0 458 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 ABHD4Q8TB40 342 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 ZDHHC12Q96GR4 267 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 CASD1Q96PB1 797 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 ZFYVE21Q9BQ24 234 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 SULT4A1Q9BR01 284 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 TPSD1Q9BZJ3 242 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 SRRQ9GZT4 340 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 TCEAL2Q9H3H9 227 aaPredicted RBP11.99□□□□□ -0.49
SCN1B-202ENST00000415950 TAAR2Q9P1P5 351 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 KLHL21Q9UJP4 597 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 ATG4BQ9Y4P1 393 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 BACE2Q9Y5Z0 518 aa11.99□□□□□ -0.49
SCN1B-202ENST00000415950 NPC1O15118 1278 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF780AO75290 641 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 IFNA10P01566 189 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 F3P13726 295 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 HIST1H1TP22492 207 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 RPS27P42677 84 aaKnown RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 SOX9P48436 509 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 NKX6-1P78426 367 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 DGCR2P98153 550 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 CDC20Q12834 499 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 SLC35D2Q76EJ3 337 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 SGPP2Q8IWX5 399 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF511Q8NB15 262 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 C1QTNF3Q9BXJ4 246 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 C1QTNF2Q9BXJ5 285 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 PLEKHJ1Q9NW61 149 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 GLS2Q9UI32 602 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 LOXHD1Q8IVV2 1947 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 OR6C6A6NF89 314 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 NAP1L6A6NFF2 107 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 LGALS8O00214 317 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 CASC3O15234 703 aaKnown RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 KLK8O60259 260 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 CCL5P13501 91 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 MAOAP21397 527 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 FBLP22087 321 aaKnown RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 MCCD1P59942 119 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 MEPCEQ7L2J0 689 aaKnown RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 C3orf49Q96BT1 292 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 A3GALT2U3KPV4 340 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 CDHR4A6H8M9 788 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 RFXAPO00287 272 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 EGFP01133 1207 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 IFNA1P01562 189 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 CSF1P09603 554 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 PTHLHP12272 177 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 PSMB1P20618 241 aaKnown RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 VASPP50552 380 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 TMEM31Q5JXX7 168 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 PDSS1Q5T2R2 415 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 AFMIDQ63HM1 303 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 C17orf99Q6UX52 265 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 C17orf107Q6ZR85 190 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 TMEM151BQ8IW70 566 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 ADAMTS14Q8WXS8 1223 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 SFXN2Q96NB2 322 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 VRK1Q99986 396 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 C1GALT1Q9NS00 363 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 ZAR1LA6NP61 321 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 PRAMEF2O60811 474 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 THBS2P35442 1172 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 SLC6A11P48066 632 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 P2RX3P56373 397 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 SRYQ05066 204 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 GGTA1PQ4G0N0 100 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 FAHD1Q6P587 224 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 ABHD12BQ7Z5M8 362 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF454Q8N9F8 522 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 FNDC9Q8TBE3 224 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF587Q96SQ5 575 aaPredicted RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 WASH6PQ9NQA3 447 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 HINT3Q9NQE9 182 aaKnown RBP11.98□□□□□ -0.49
SCN1B-202ENST00000415950 MARCH5Q9NX47 278 aa11.98□□□□□ -0.49
SCN1B-202ENST00000415950 TRABD2BA6NFA1 517 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 OIP5O43482 229 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 PRKNO60260 465 aaPredicted RBP11.97□□□□□ -0.49
SCN1B-202ENST00000415950 SLC43A1O75387 559 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 IFNA4P05014 189 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 IFNGR1P15260 489 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 GABRR1P24046 479 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 LIM2P55344 173 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 HTR4Q13639 388 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 RAB33AQ14088 237 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 MRPL2Q5T653 305 aaKnown RBP11.97□□□□□ -0.49
SCN1B-202ENST00000415950 LIMS2Q7Z4I7 341 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF566Q969W8 418 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 TM4SF18Q96CE8 201 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 OR2M2Q96R28 347 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 INTS14Q96SY0 518 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 SPNS1Q9H2V7 528 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms