RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 NRG2O14511 850 aaPredicted RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 GOSR2O14653 212 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 LRRTM2O43300 516 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 PCDH7O60245 1069 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 FADS1O60427 444 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 OR2F2O95006 317 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 ANXA2P07355 339 aaKnown RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 C1GALT1C1LP0DN25 315 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 NR2C1P13056 603 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 MST1P26927 711 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 MPGP29372 298 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 CRABP1P29762 137 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 BDKRB2P30411 391 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 SDHAP31040 664 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 XCR1P46094 333 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 PPIAP62937 165 aaKnown RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 OR2F1Q13607 317 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 KLF9Q13886 244 aaPredicted RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 MPPED2Q15777 294 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 PRAMEF14Q5SWL7 426 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 OR52W1Q6IF63 320 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 SFXN4Q6P4A7 337 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 TSSK4Q6SA08 328 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 FAM129CQ86XR2 697 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 TGIF2LXQ8IUE1 241 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 RNF175Q8N4F7 328 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 FAM98AQ8NCA5 519 aaKnown RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 TSTD1Q8NFU3 115 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 CMTM3Q96MX0 182 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 ZNF582Q96NG8 517 aaPredicted RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 LRFN5Q96NI6 719 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 DMRTA2Q96SC8 542 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 SPSB2Q99619 263 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 TPSD1Q9BZJ3 242 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 HRASLSQ9HDD0 168 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 PRSS16Q9NQE7 514 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 VPS29Q9UBQ0 182 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 RCE1Q9Y256 329 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 H7BY64 318 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 RBBP9O75884 186 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 RAB3DO95716 219 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 ZNF44P15621 663 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 C5AR1P21730 350 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 NOS3P29474 1203 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 SORDQ00796 357 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 TIAL1Q01085 375 aaKnown RBP eCLIP7.25□□□□□ -1.25
SIK3-203ENST00000415541 ACVR1Q04771 509 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 MESP2Q0VG99 397 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 C1orf61Q13536 156 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 SCARB2Q14108 478 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 NDUFAF6Q330K2 333 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 SLC25A30Q5SVS4 291 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 C18orf63Q68DL7 685 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 TMEM71Q6P5X7 295 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 ZNF551Q7Z340 670 aaPredicted RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 ARRDC1Q8N5I2 433 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 OR4E2Q8NGC2 313 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 C15orf40Q8WUR7 153 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 RLN3Q8WXF3 142 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 PPCDCQ96CD2 204 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 DTD2Q96FN9 168 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 HSPA12BQ96MM6 686 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 PRAP1Q96NZ9 151 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 GPR61Q9BZJ8 451 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 KRCC1Q9NPI7 259 aaPredicted RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 ZNF282Q9UDV7 671 aaPredicted RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 TESQ9UGI8 421 aaKnown RBP7.25□□□□□ -1.25
SIK3-203ENST00000415541 CYP8B1Q9UNU6 501 aa7.25□□□□□ -1.25
SIK3-203ENST00000415541 DENND4AQ7Z401 1863 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 TRBC2A0A5B9 178 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 CTDSPLO15194 276 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 RDH16O75452 317 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 RLN1P04808 185 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 TFPIP10646 304 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 APEHP13798 732 aaKnown RBP7.24□□□□□ -1.25
SIK3-203ENST00000415541 EDN3P14138 238 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 AGAP20933 346 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 ACHEP22303 614 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 P2RY2P41231 377 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 RGS19P49795 217 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 RNF144AP50876 292 aaPredicted RBP7.24□□□□□ -1.25
SIK3-203ENST00000415541 LUMP51884 338 aaPredicted RBP7.24□□□□□ -1.25
SIK3-203ENST00000415541 EIF5AP63241 154 aaKnown RBP7.24□□□□□ -1.25
SIK3-203ENST00000415541 DOC2AQ14183 400 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 GINS1Q14691 196 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 RGNQ15493 299 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 SYT14P1Q58G82 188 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 TMEM255AQ5JRV8 349 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 KRBOX4Q5JUW0 171 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 COL13A1Q5TAT6 717 aaPredicted RBP7.24□□□□□ -1.25
SIK3-203ENST00000415541 TRIM40Q6P9F5 258 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 ETV3LQ6ZN32 361 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 TMPRSS11FQ6ZWK6 438 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 DPPA4Q7L190 304 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 OR9A1PQ8NGU1 263 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 SMIM4Q8WVI0 70 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 FCAMRQ8WWV6 532 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 RSPRY1Q96DX4 576 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 PIGQQ9BRB3 760 aa7.24□□□□□ -1.25
SIK3-203ENST00000415541 SLC17A9Q9BYT1 436 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms