RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CALUO43852 315 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 STX11O75558 287 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SOX30O94993 753 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 TSPAN13O95857 204 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 APOHP02749 345 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 S100A6P06703 90 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PNMA6AP0CW24 399 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 PRPS2P11908 318 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 GM2AP17900 193 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 QARSP47897 775 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 RFX2P48378 723 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PSMC5P62195 406 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 FKBP3Q00688 224 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 PLOD1Q02809 727 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 ITGB3BPQ13352 177 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 PARP6Q2NL67 630 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ACCSLQ4AC99 568 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CD164L2Q6UWJ8 174 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CREB3L2Q70SY1 520 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CCDC60Q8IWA6 550 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 LSMEM2Q8N112 164 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ALLCQ8N6M5 410 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ACOT4Q8N9L9 421 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 OR52N5Q8NH56 324 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SLC2A14Q8TDB8 520 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SCARB1Q8WTV0 552 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CNRIP1Q96F85 164 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 PELI1Q96FA3 418 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ARL5BQ96KC2 179 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ACCSQ96QU6 501 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CENPKQ9BS16 269 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 BBS2Q9BXC9 721 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CHRNA10Q9GZZ6 450 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SGK2Q9HBY8 427 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SPHK1Q9NYA1 384 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PIPOXQ9P0Z9 390 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ERRFI1Q9UJM3 462 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 PDE10AQ9Y233 779 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CDH23Q9H251 3354 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 DNAH12Q6ZR08 3092 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CFAP54Q96N23 3096 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 H0Y8G0 127 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 K7ERQ8 282 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SLC1A7O00341 560 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CETN3O15182 167 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 PAX4O43316 350 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 DUX1O43812 170 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 XPNPEP2O43895 674 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 STX10O60499 249 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 OR2J3O76001 311 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 DUS4LO95620 317 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 ZNF44P15621 663 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SP4Q02446 784 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 MTF1Q14872 753 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TAF13Q15543 124 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 KNOP1Q1ED39 458 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 FAM78AQ5JUQ0 283 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 RAET1LQ5VY80 246 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SLC25A25Q6KCM7 469 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CENPUQ71F23 418 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 APTXQ7Z2E3 356 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 PIM3Q86V86 326 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CCDC185Q8N715 623 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CYB561A3Q8NBI2 242 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 PPFIBP2Q8ND30 876 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ZNF248Q8NDW4 579 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ITFG1Q8TB96 612 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CA5BP1Q8WTZ4 195 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SCFD1Q8WVM8 642 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 DNASE2BQ8WZ79 361 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 DUS3LQ96G46 650 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 PPP1R16AQ96I34 528 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 PANX2Q96RD6 677 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ALG9Q9H6U8 611 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CCNB1IP1Q9NPC3 277 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 RCOR3Q9P2K3 495 aaPredicted RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 MMP17Q9ULZ9 603 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 MRPS7Q9Y2R9 242 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 MYH11P35749 1972 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ASCC3Q8N3C0 2202 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 NCANO14594 1321 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 MAST4O15021 2626 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 PLSCR5A0PG75 271 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 OR5H15A6NDH6 313 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TRABD2BA6NFA1 517 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CCT8L1PA6NM43 557 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 H3BMQ9 156 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 C16orf97H3BN30 126 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 DLGAP1O14490 977 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SCAMP2O15127 329 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 LYPLA2O95372 231 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 OR9G9P0C7N8 305 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 RBMY1CP0DJD4 496 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 RALBP11234 206 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 UQCRBP14927 111 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 WT1P19544 449 aaPredicted RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 GIFP27352 417 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CERS1P27544 350 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 GCAP28676 217 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CASP14P31944 242 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms