RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 DGCR6Q14129 220 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 PODNL1Q6PEZ8 512 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 RTL4Q6ZR62 310 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 CELF2-AS1Q8N7Q2 184 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 WDSUB1Q8N9V3 476 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 TMEM255BQ8WV15 326 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 RPL3LQ92901 407 aaKnown RBP14.1□□□□□ -0.15
SHMT2-202ENST00000414700 SGCZQ96LD1 299 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 ZNF559Q9BR84 538 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 SLA2Q9H6Q3 261 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 CCNB1IP1Q9NPC3 277 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 DEPPQ9NTK1 212 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 PPP4R1LQ9P1A2 415 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 FBXL2Q9UKC9 423 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 RAXQ9Y2V3 346 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 GNB5O14775 395 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 CDC40O60508 579 aaKnown RBP eCLIP14.1□□□□□ -0.15
SHMT2-202ENST00000414700 OR5F1O95221 314 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 CD36P16671 472 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 GTF2E2P29084 291 aaKnown RBP14.1□□□□□ -0.15
SHMT2-202ENST00000414700 DNASE1L1P49184 302 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 P2RX1P51575 399 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 P2RX3P56373 397 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 OR2B6P58173 313 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 ST3GAL3Q11203 375 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 ARSKQ6UWY0 536 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 MEX3DQ86XN8 651 aaKnown RBP14.1□□□□□ -0.15
SHMT2-202ENST00000414700 DND1Q8IYX4 353 aaKnown RBP14.1□□□□□ -0.15
SHMT2-202ENST00000414700 OR5W2Q8NH69 310 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 GRPEL2Q8TAA5 225 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 NTNG2Q96CW9 530 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 FRMD6Q96NE9 622 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 SECISBP2Q96T21 854 aaKnown RBP14.1□□□□□ -0.15
SHMT2-202ENST00000414700 ANGPTL4Q9BY76 406 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 NXF2Q9GZY0 626 aaKnown RBP14.1□□□□□ -0.15
SHMT2-202ENST00000414700 ACOT13Q9NPJ3 140 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 CAB39Q9Y376 341 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-202ENST00000414700 CSAG2Q9Y5P2 127 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 HSPE1-MOB4S4R3N1 261 aa14.1□□□□□ -0.15
SHMT2-202ENST00000414700 A0A087WUU8 490 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 MED19A0JLT2 244 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-202ENST00000414700 CENPXA8MT69 81 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 CCRL2O00421 344 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 RGS10O43665 173 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 ICMTO60725 284 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 FADS2O95864 444 aaKnown RBP14.09□□□□□ -0.15
SHMT2-202ENST00000414700 FMO3P31513 532 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 DDOSTP39656 456 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 HTR3AP46098 478 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 CLK1P49759 484 aaKnown RBP14.09□□□□□ -0.15
SHMT2-202ENST00000414700 GALK2Q01415 458 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 MICAQ29983 383 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 ALG10BQ5I7T1 473 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 DCST1Q5T197 706 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 TMEM81Q6P7N7 255 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 P3H2Q8IVL5 708 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 MISPQ8IVT2 679 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 ZNF440Q8IYI8 595 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 UBQLNLQ8IYU4 475 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 SPERTQ8NA61 448 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 GPR119Q8TDV5 335 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 C3orf49Q96BT1 292 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 FEVQ99581 238 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 UTP23Q9BRU9 249 aaKnown RBP14.09□□□□□ -0.15
SHMT2-202ENST00000414700 TRIM2Q9C040 744 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 TMEM27Q9HBJ8 222 aa14.09□□□□□ -0.15
SHMT2-202ENST00000414700 SNX4O95219 450 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 POU2F1P14859 743 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 DAPP51397 102 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 SNTA1Q13424 505 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 TRAM2Q15035 370 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 OR1C1Q15619 314 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 ZNF770Q6IQ21 691 aaPredicted RBP14.08□□□□□ -0.15
SHMT2-202ENST00000414700 ZNF613Q6PF04 617 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 HIPK1Q86Z02 1210 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 PARP16Q8N5Y8 322 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 OR10G2Q8NGC3 310 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 ZNF563Q8TA94 476 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 JSRP1Q96MG2 331 aaPredicted RBP14.08□□□□□ -0.15
SHMT2-202ENST00000414700 GNRHR2Q96P88 292 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 TMEM246Q9BRR3 403 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 C6orf62Q9GZU0 229 aaPredicted RBP14.08□□□□□ -0.15
SHMT2-202ENST00000414700 EVA1AQ9H8M9 152 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 TMEFF2Q9UIK5 374 aaPredicted RBP14.08□□□□□ -0.15
SHMT2-202ENST00000414700 PRELID1Q9Y255 219 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 GRIP1Q9Y3R0 1128 aa14.08□□□□□ -0.15
SHMT2-202ENST00000414700 FAM25AB3EWG3 89 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 FAM25CB3EWG5 89 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 FAM25GB3EWG6 89 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 PIP5K1CO60331 668 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 S100A5P33763 92 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 TGFBR1P36897 503 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 ARHGDIAP52565 204 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 CBFBQ13951 182 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 QPRTQ15274 297 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 SLC30A6Q6NXT4 461 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 SPATC1Q76KD6 591 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 TOR1AIP2Q8NFQ8 470 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 OR4K5Q8NGD3 323 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 SLC38A4Q969I6 547 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms