RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 BCHEP06276 602 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 CDH2P19022 906 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-204ENST00000413232 CXCR1P25024 350 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 MPGP29372 298 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 ANXA11P50995 505 aaKnown RBP16.8■□□□□ 0.28
CPSF7-204ENST00000413232 MAP2K6P52564 334 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 GNA13Q14344 377 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 GSTA3Q16772 222 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 PDCD4Q53EL6 469 aaKnown RBP16.8■□□□□ 0.28
CPSF7-204ENST00000413232 HIKESHIQ53FT3 197 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 NXNQ6DKJ4 435 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 LINGO2Q7L985 606 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 AAED1Q7RTV5 226 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 HIPK1Q86Z02 1210 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 CADM2Q8N3J6 435 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 GLB1L3Q8NCI6 653 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-204ENST00000413232 C1orf162Q8NEQ5 155 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-204ENST00000413232 NANOS1Q8WY41 292 aaKnown RBP16.8■□□□□ 0.28
CPSF7-204ENST00000413232 OR52B2Q96RD2 323 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 ZBTB18Q99592 522 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 TPT1P8Q9HAU6 139 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 P2RX2Q9UBL9 471 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 ZNF443Q9Y2A4 671 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-204ENST00000413232 ATP23Q9Y6H3 246 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 FBN3Q75N90 2809 aa16.8■□□□□ 0.28
CPSF7-204ENST00000413232 TRPC5OSA6NMA1 111 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 ATP6V1G2-DDX39BF2Z307 99 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 KLF11O14901 512 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 IL6P05231 212 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 GPIP06744 558 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 NUDT7P0C024 238 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 CRATP43155 626 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 LRRC74AQ0VAA2 488 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 RAB35Q15286 201 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 MST1LQ2TV78 715 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 SERPINA11Q86U17 422 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 GPAT4Q86UL3 456 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 ZNF440Q8IYI8 595 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 C17orf78Q8N4C9 275 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 SF3B5Q9BWJ5 86 aaKnown RBP16.79■□□□□ 0.28
CPSF7-204ENST00000413232 ADPRHL2Q9NX46 363 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 MOKQ9UQ07 419 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 AMDHD2Q9Y303 409 aa16.79■□□□□ 0.28
CPSF7-204ENST00000413232 ELOA3DA6NLF2 546 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-204ENST00000413232 H7C417 338 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 FRS3O43559 492 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 NPIPB7O75200 414 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 ZCCHC18P0CG32 403 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 IDO1P14902 403 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 SELENOPP49908 381 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 DSTNP60981 165 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 HOXC5Q00444 222 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 TMEM249Q2WGJ8 235 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 ELOA3BQ3SY89 546 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 LIN52Q52LA3 116 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 WBP2NLQ6ICG8 309 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 HMBOX1Q6NT76 420 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 ZNF544Q6NX49 715 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 CREB3L2Q70SY1 520 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 DEPDC4Q8N2C3 294 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 ELOA3Q8NG57 546 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 SPATA3Q8NHX4 192 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 TMEM19Q96HH6 336 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 MANSC1Q9H8J5 431 aa16.78■□□□□ 0.28
CPSF7-204ENST00000413232 SDR39U1Q9NRG7 319 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-204ENST00000413232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.78■□□□□ 0.281e-7■■■□□ 17.4
CPSF7-204ENST00000413232 A8MV72 311 aaPredicted RBP16.77■□□□□ 0.28
CPSF7-204ENST00000413232 A8MVM7 634 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 LGI1O95970 557 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 UQCRBP14927 111 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 CRISP3P54108 245 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 PRPS1P60891 318 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 TGFBR3Q03167 851 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 C6orf52Q5T4I8 152 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 RNF220Q5VTB9 566 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 C1orf140Q5VVS0 124 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 TMEM225Q6GV28 225 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 CLEC2AQ6UVW9 174 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 EPHX4Q8IUS5 362 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 KDM8Q8N371 416 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 C3orf49Q96BT1 292 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 BOD1Q96IK1 185 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 TNFRSF13CQ96RJ3 184 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 ZIM2Q9NZV7 527 aa16.77■□□□□ 0.28
CPSF7-204ENST00000413232 IGHV1-18A0A0C4DH31 117 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 TMEM229AB2RXF0 380 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 NR5A2O00482 541 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 UPK3AO75631 287 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 ANP32DO95626 131 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 APOBEC3AP31941 199 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-204ENST00000413232 EGR4Q05215 589 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 LOXL1Q08397 574 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-204ENST00000413232 SWI5Q1ZZU3 235 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 POMGNT2Q8NAT1 580 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 C10orf105Q8TEF2 133 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 GTF2H4Q92759 462 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 MAL2Q969L2 176 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 ALKBH3Q96Q83 286 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-204ENST00000413232 PTDSS2Q9BVG9 487 aa16.76■□□□□ 0.27
CPSF7-204ENST00000413232 SPATA9Q9BWV2 254 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms